KEGG   Triticum aestivum (bread wheat): 123165507
Entry
123165507         CDS       T07757                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
taes  Triticum aestivum (bread wheat)
Pathway
taes03018  RNA degradation
taes03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:taes00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123165507
  09123 Folding, sorting and degradation
   03018 RNA degradation
    123165507
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:taes03019]
    123165507
   03041 Spliceosome [BR:taes03041]
    123165507
Messenger RNA biogenesis [BR:taes03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     123165507
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     123165507
Spliceosome [BR:taes03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    123165507
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 123165507
NCBI-ProteinID: XP_044439101
UniProt: A0A3B6U629
LinkDB
Position
7D:460020896..460022986
AA seq 104 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFEREQDDPLKL
STKTRQLGLIVCRGTAVMLVSPTEGTEEIKNPFQEADGEQTAHS
NT seq 315 nt   +upstreamnt  +downstreamnt
atgtcggggcgcaaggagacggtgctggacctggccaagttcgtcgacaagggcgtccag
gtcaagctcaccggcggcaggcaagttacaggaactttgaagggctatgaccagcttctg
aacttggtgcttgatgaagcgattgagtttgaaagagagcaagacgatccactgaaactg
tcgacaaaaaccagacagcttggtctcattgtctgcaggggcacagcggtgatgcttgta
tcgccaacggagggaacagaggagatcaaaaaccccttccaagaggctgatggagaacaa
accgctcactcctaa

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