Triticum aestivum (bread wheat): 123165507
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Entry
123165507 CDS
T07757
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123165507
09123 Folding, sorting and degradation
03018 RNA degradation
123165507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123165507
03041 Spliceosome [BR:
taes03041
]
123165507
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123165507
mRNA degradation factors
5'-3' decay
Lsm complex
123165507
Spliceosome [BR:
taes03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123165507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
123165507
NCBI-ProteinID:
XP_044439101
UniProt:
A0A3B6U629
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Position
7D:460020896..460022986
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AA seq
104 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFEREQDDPLKL
STKTRQLGLIVCRGTAVMLVSPTEGTEEIKNPFQEADGEQTAHS
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcgcaaggagacggtgctggacctggccaagttcgtcgacaagggcgtccag
gtcaagctcaccggcggcaggcaagttacaggaactttgaagggctatgaccagcttctg
aacttggtgcttgatgaagcgattgagtttgaaagagagcaagacgatccactgaaactg
tcgacaaaaaccagacagcttggtctcattgtctgcaggggcacagcggtgatgcttgta
tcgccaacggagggaacagaggagatcaaaaaccccttccaagaggctgatggagaacaa
accgctcactcctaa
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