Triticum aestivum (bread wheat): 123166762
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Entry
123166762 CDS
T07757
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123166762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123166762
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123166762
mRNA degradation factors
5'-3' decay
Decapping complex
123166762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
DUF445
Beta-prop_EML_2
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
123166762
NCBI-ProteinID:
XP_044440495
LinkDB
All DBs
Position
7D:184716538..184725536
Genome browser
AA seq
1309 aa
AA seq
DB search
MASPSGNPNPNPNPNVPFELSRLFKPPPNPNHPTTVPTPTGIFPGAPPGAPMVTGPPGPY
SYPPATPPFHRNQYLNYPTDPNAVHLPVAAFANPNPAANPIPNHSPGPNPGARLMQLLGN
TAPTHLESVVSMPPTSSEFSGGPVAPLPAMPSAPPARMTSTSSKMPRGRLLGPGDRAVHD
VDSRLPGEAQPPQLEVTPITKYTSDPGLVLGRQIAVNRTYIVYGLKLGNIRVLNINTALR
SLLRGHTQRVTDMAFFAEDVHRLASASVDGRIYVWKIDEGPDEENKPQITGKIEMAIQIV
GDAGTYHPRICWHSHKQEILFVGIGNCVLKIDTTKVGRGRDFSKEEPLKCSLDKLIDGVH
LVGKHDGDVTDLSLSQWMTTRLASASKDGTVKIWDDRRTVPLSVMKPHDGKAVYSVSFLT
APEQPNHINLVTAGPLNREVKIWASSDKEGWLLPSESETWRCTQTLELVSSLENRFEEAF
FNQVAVLPQASLILLANAKKNAIYAIHVEYGPDPASTRLDYIADFTVAMPILSLTGTHES
QPDGEHVVQVYCVQTMAIQQYGLELSLCLPPTADNAGLGRDLAISHVYERPLEVASVESS
TETKPLSDHQGTEVDTATHVSSPTPSSNMDNAGSYAEAVLRRDASRGPSLGDHDGDKSSV
DYSKKRMDSDGTSGQGAFDRKDCFGNEEPRGGQVDGTVSDPHPTFKVGVNATHLITPSEI
ISGVLPSAESTANGSPQNAEMESKLVVEKKADQNIGFEDVKETQIVQEKMERLNMSSEQT
VETISERSVTTDKYSVEDSQRSDPTLLKQHSGARDENLPRRTAEATENINGSSSRNLQLP
SPTKEEKVLHPQVSGQMSPLTSTFNSTDSSHEHPSNTNPAIDSVPQVSAIQGKLQQLMAM
HTDMQKQLNTIVSAPIAKEGKRIETSLGRNIEKSIKANVDAMWARIQEENARHEKVERER
MQQISTLITTSVNKDIPAILEKSLKREISLLGPTIARTTTPIIEKSLSSAVSDSLQKVLG
EKVANQLDKSISTKLEATVAKQIQTQFHTSAKQALQDALRSSFESSIIPAFEQSCKTMFE
QVDGAFQKGMSEHGTAIQQQVAAAHSPLAQTLRETINSASSITQGLTSELLDGQRKLLAL
VASGNPISHNTALQPINGPIPNLPEADVPLDPMKELTRLLSEQKIDEAFTMALQRSDVSM
VSWLCSQVDLQGLCRLNPVPLNQGVLLALFQQLACDIANDTPLKLQWMTAVAMAIQPTHQ
MIAAHVRPIFEQVYGVLARQQSVPGTSPLEANNIRLMMHVINSVMMTHK
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccctccggaaaccctaatcccaaccccaaccccaacgtccccttcgagctc
agcaggctcttcaagcctcccccaaaccctaaccaccccacaaccgtgccgacccccact
ggcatcttcccgggcgccccgcccggcgcgccgatggtcaccgggccgccgggcccctac
tcctacccgcccgccaccccgcccttccaccgcaaccagtacctcaactaccccaccgat
cccaacgccgtccacctccccgtcgccgccttcgcgaaccctaaccccgccgcaaaccct
atccctaaccacagccccggccccaatccgggagctcggctcatgcagctgctgggcaac
accgcgcccacccacctcgagtccgtggtgtccatgccgcctacgtcatcggagttctct
ggcggcccggtggcgccgctgccagcgatgccgtccgcgccgccggcgaggatgacaagc
acaagcagcaagatgccccggggcaggctgctgggaccgggggacagggccgtgcacgac
gtggactcgcggctgccaggggaggcgcagccaccacagctggaagtgacgcccatcacc
aagtacacttcggacccggggttggtgctgggccggcagatcgctgtaaaccgaacgtac
atcgtgtacggcctcaagcttggcaacatccgcgtgctcaacatcaacaccgcactccgc
tcgctccttcgtgggcacacacagagggtgacggacatggctttctttgcagaagatgtc
catcgtttagcaagtgcaagcgtagatgggcgtatatatgtatggaagattgacgaggga
cccgatgaggaaaataaaccacaaatcacaggaaagattgaaatggccatccagatagta
ggagatgctggaacttaccatccaagaatatgctggcactcccataagcaagaaattctg
tttgttggaatagggaactgtgtcttaaaaatagacacaacaaaagtgggaagaggaaga
gacttcagtaaagaagagcctcttaaatgttcacttgataagctcattgatggtgtgcac
ttggttggtaaacatgacggggatgtcacagatctgtccttatctcaatggatgactacc
cgtctggcttcagcatcaaaagatggcacggtaaaaatctgggatgatcgcaggacagtg
cctttatctgtgatgaaaccgcatgatggtaaagctgtttattcggtttctttccttaca
gcaccagagcaaccaaatcatataaatctcgttacagcggggcctctcaaccgagaagta
aaaatctgggcttcctctgataaggaaggttggttgttgccaagtgaatctgagacttgg
agatgcactcaaactctggaacttgtgagttctctggaaaataggtttgaggaagcattt
ttcaaccaagtagcagtgttgccacaagctagccttattttgcttgcgaatgccaaaaag
aacgctatatatgctattcatgttgagtatggtccagatcctgcttctactcgtctggac
tatatagcagatttcacagttgcaatgcctattttaagtctgacgggaacacatgaaagc
cagcctgatggtgaacatgtagtacaagtctattgtgtccagacaatggctatccagcag
tatggattggagttatcactctgtttgcctcctacagctgataacgctgggcttggtagg
gatctggctatttcccatgtatatgagagacctctagaagtggcatcagtggagtcatca
acagaaactaaaccactgagtgatcatcagggaacagaagttgatactgctactcatgtc
tcatccccaactccttcatcaaacatggataatgctggatcttatgcagaagctgtcttg
agaagagatgcttcaagaggtccatctcttggtgatcatgatggggacaagtcatctgtt
gattattcaaagaaaaggatggattctgatggtacaagtgggcaaggagcatttgatagg
aaggattgctttgggaatgaagagccaagaggtggccaggttgatggtacagtttcagat
cctcatcccacgtttaaggtcggagtgaatgccacacacttgattaccccatctgaaatt
atttcaggtgtgctcccatctgctgaatcgactgctaatggcagcccacagaatgcagaa
atggagtcaaaacttgtggttgagaaaaaagcagatcaaaatattggatttgaggatgtt
aaggagacccaaattgttcaagagaaaatggagagacttaacatgtcttcagagcaaact
gtagagacaattagtgaacgttcggtaacaactgacaagtatagtgtggaagattcacag
agatcagaccccacacttctgaaacaacattctggtgctcgggatgaaaatcttccaaga
agaacagctgaagctactgaaaacatcaatggctcttcgtcaaggaacttgcagttaccc
tcacctaccaaagaggagaaagttctgcatcctcaggtgtctgggcagatgtctcctctt
acaagcactttcaactctactgattcatcacatgaacacccaagcaatacaaaccctgcc
attgattctgtcccgcaagtatctgccattcaaggaaaattgcaacagcttatggcaatg
catactgacatgcaaaagcagctgaacacaattgtgtctgctcctattgcaaaggagggc
aaaaggatcgagacatcacttgggcgtaatattgagaagtccataaaggctaacgttgat
gccatgtgggctcgtatccaggaggaaaatgcaaggcatgaaaaggttgaaagagagcga
atgcagcagatttctactctaatcacaacttctgtaaacaaggacattcctgctatactg
gagaaatcattaaagagagaaatatcgttgttgggacccaccattgcacgaacaacaaca
cctatcattgagaagtccttgtcttctgctgtttcggattcgcttcagaaagttctcggg
gaaaaggttgcgaatcagctggataagtccataagtacgaaacttgaagctactgttgct
aagcagatccaaacacagttccatacatctgccaagcaggcacttcaggatgctttacgg
tcaagctttgagtcatcaattatcccagcatttgaacaatcttgtaagacaatgtttgag
caagtggatggtgcattccagaagggcatgtctgagcatggtactgctatccagcagcag
gttgcagcagcacatagtccattggcacagactttaagggaaacaatcaattcagcatca
tcaattacccagggtcttacatcagagttacttgatggccagcgcaagcttttggcacta
gttgcatcagggaacccaatatcacataatactgctttgcagcccatcaacggaccaata
cccaatctccccgaggctgatgttccactggacccgatgaaggagttaaccagactatta
tctgagcaaaaaatcgatgaggcgtttacgatggctcttcaaagaagtgacgtctccatg
gtatcttggttgtgctctcaggttgatttgcaaggtctgtgtagactgaaccccgttcct
ctgaaccaaggggtccttctggcccttttccagcaactggcatgcgacatagccaacgac
acacccctgaagcttcaatggatgacagcggtcgccatggcaatccaaccaacccatcag
atgattgcagcgcatgtgaggccaatatttgagcaagtctatggcgtcttggcccgccaa
cagtcggtaccaggaaccagcccactggaagccaacaacatccgcctaatgatgcatgta
atcaactcggtgatgatgacccacaagtga
DBGET
integrated database retrieval system
