Triticum aestivum (bread wheat): 123167020
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Entry
123167020 CDS
T07757
Name
(RefSeq) transducin beta-like protein 3 isoform X1
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123167020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
taes03009
]
123167020
Ribosome biogenesis [BR:
taes03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
123167020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Utp13
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD_LRWD1
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_IP5PC_F
WDR54
WD40_like
Beta-prop_NUP159_NUP214
Ge1_WD40
Cytochrom_D1
Beta-prop_WDR75_2nd
UTP15_C
Polysacc_lyase-like
Motif
Other DBs
NCBI-GeneID:
123167020
NCBI-ProteinID:
XP_044440793
UniProt:
A0A3B6TYU9
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Position
7D:complement(609550268..609556219)
Genome browser
AA seq
882 aa
AA seq
DB search
MALSQGPKNNYRCDRSLQQFYTGGPFAVGRAPRGQGEGEEAFLACACGSELRVVSATDAS
AIGEPIDGDSEAVTGIALSPDSRLLFAAGHSKLIRVWDLASRTCIRSWKGHDGPVMAMSC
HASGGLLATAGADKKVCVWDVDGGFCTHFFRGHTGVVTTIMFHKDPKRLLLFSGSDDGTV
RVWNLESKKCIAVLNAHFSTVTSLALSEDGLTLLSAGRDKVVNVWDLRKYASKKTIPAYE
MIEGVSFIGPGSGILACLGAEAAKLKEKTDGYFLTVGERGIVRIWCLESAVCVFEQQSSD
VTINSENEESRRGFTATNMLPDDQGILCVTADQQFLFYSCTRTDEGTFQLNLYKRLIGYN
DEILDVKFVGEEEQYLAVATNLEQVRVYDVASMSCSYVLAGHTEIVVCLDTCVSASGKTL
VVTGSKDNTVRLWDMEKRSCIGTGKGHLGAIGCVAFSKKSKNFFVSGSSDRTIKVWTWDD
TLIDAGGEVPLKAKAGVAAHDKDINSLSVSPNDGLVCSGSEDRTASIWKLPNLVSSVVLK
GHKRGIWSVEFSPVEQCVITSSGDKTVKIWHVADGSCLKTFEGHTSSVLRASFLSRGTQF
VSCGSDGLVKLWTIKTNECIATYDRHDGKVWALAVGKKTEMLATGGTDSDLNLWHDCTME
DKQEDFLKKEEEVLRGQELENAVSDSDYTRAIQLAFELRRPRRLLELFSQLCRKADPEDP
IEKALVGLPKEGLRVLLEYIREWNTKPKFCHVAQFVLFRVLRSLPPTDILETKGISELLE
GLIPYSQRHFSRVDRLVRSTFLLDYTLTRMSVVDPDVDGGTTKDVTNDSSMNNAEIAPAE
PAQETPEKPGRKRKSSKTTQSSKKSSKKVKASYSSAAVSVEA
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtcgcaggggcccaagaacaactaccgctgcgaccgctcgctgcagcagttc
tacacgggcgggcctttcgccgtcgggcgagccccccgcggccaaggcgaaggcgaggag
gcgttcctcgcgtgtgcctgcggcagcgagctgcgtgtggtgtccgccaccgacgcctcc
gccataggggagcccatcgacggcgactccgaggccgtcacggggattgcgctgtccccc
gactcccgcctgctctttgctgctggccacagcaagcttattagggtctgggacctcgcg
tctcgcacttgcatccgcagctggaagggacatgatggtcctgttatggccatgtcatgc
catgcttctggtgggttgcttgcaactgccggagcagacaagaaggtttgcgtgtgggat
gtggatggtggattttgcacacatttctttagaggtcatacaggtgttgtcacaaccata
atgttccacaaagatccaaagcgccttctgttattttcaggaagtgatgatggcacagtg
cgtgtttggaaccttgaaagcaaaaaatgcattgcagtgcttaacgcacatttttcaaca
gtgacttcgttggcattatcagaagatgggctaacattgctcagtgcaggaagggataag
gttgtgaatgtgtgggatcttcggaagtacgcctcgaagaagacaataccagcatatgaa
atgatagaaggtgtttccttcattggaccagggagcggcatcttggcttgtttgggtgcc
gaagcggcaaagttgaaggaaaaaacggatggttattttcttacggttggtgaacgcgga
atcgtgcgcatatggtgcttggaaagcgctgtctgcgtgtttgagcagcagtcatctgat
gtaaccatcaactcagaaaacgaggaatctagaaggggctttacagctactaatatgttg
ccagatgatcaaggaattctatgtgtcactgctgatcaacaatttttgttctattcttgt
acaagaactgatgaagggactttccagttgaacctatataaacgtctaataggttataat
gatgagattcttgatgtgaagtttgttggggaagaggaacaatatcttgccgtagccact
aacttggagcaggtccgtgtttatgacgttgcatcaatgtcatgttcttatgtgctggcg
ggtcacactgaaattgttgtttgccttgatacttgtgtgtctgcttctgggaagacactt
gttgtaactgggagcaaagataatactgtaagattgtgggatatggaaaagagaagctgt
attggtactggtaaaggccatctaggagctattggttgtgttgctttctcaaagaagtcg
aagaacttttttgttagtggtagcagtgaccgaaccatcaaggtttggacctgggatgat
acactcattgatgctggcggtgaagttcctctcaaagcaaaggctggtgtagctgcacat
gataaagatattaattctctgtctgtctcacctaatgacggccttgtttgcagtggttcg
gaggaccgaactgcaagcatatggaaactccctaacctagtgtcctctgttgtccttaaa
gggcataaaaggggcatttggtcagttgagttttcccctgttgaacaatgtgtcataaca
tcatctggtgacaaaactgtcaaaatatggcatgttgctgatggctcatgcctgaagaca
tttgagggtcatacgtcaagtgttttaagagcttcattcctttcacgtggaactcagttt
gtttcttgtggaagcgatggtctagtgaagctatggacgataaaaacgaatgaatgcatt
gctacgtatgacaggcacgatgggaaggtttgggcactggctgttggcaagaaaactgaa
atgcttgctactggcggaactgattctgatcttaacctttggcacgattgcacgatggaa
gataagcaggaggatttccttaagaaggaggaggaagttttaagaggccaggaattggaa
aatgcagtgtcagattctgactatacaagagcaattcaactcgcatttgagcttagaaga
ccacgcaggcttcttgagttattctcacagctttgcaggaaagctgatccagaggaccct
atagaaaaagcccttgttggtctcccaaaggaagggcttcgcgtgcttcttgagtatata
cgtgaatggaacacaaagcccaagttttgtcatgttgcacagtttgtactttttcgggtg
ttgaggagcttgcctcccactgatatcctggagacaaaaggcatcagtgagctcctcgag
ggcctcattccatattcgcaaaggcacttcagcagagtcgatagactagtgcgcagcaca
tttttattggactacaccttgacccgaatgtctgtcgtagacccagacgtagatgggggc
acgaccaaagatgttacaaacgactcgtcaatgaacaatgctgagatcgcgcctgcagag
cctgcgcaggagaccccggagaagccgggcaggaagagaaaatccagcaaaacaacccaa
tcaagcaagaaaagtagtaagaaggtgaaggcttcttattcgagcgctgctgtttctgtt
gaggcgtaa
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