Triticum aestivum (bread wheat): 123169162
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Entry
123169162 CDS
T07757
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 52A-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123169162
03041 Spliceosome [BR:
taes03041
]
123169162
03036 Chromosome and associated proteins [BR:
taes03036
]
123169162
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123169162
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123169162
mRNA cycle factors
Common to processing body (P body) and stress granule
123169162
Spliceosome [BR:
taes03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123169162
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123169162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SBP_bac_11
CMS1
SBP_bac_1
Motif
Other DBs
NCBI-GeneID:
123169162
NCBI-ProteinID:
XP_044442948
LinkDB
All DBs
Position
7D:complement(450870423..450876239)
Genome browser
AA seq
741 aa
AA seq
DB search
MASSDEWGDDAAGGEWTTVTRSGRPSHAGAAGRSPNAKRAAPRPPKPAAPTVGEVGEGLA
GLDVDGASRTGRLDKYDIPVEVSGDGAPAPADGFEQAGLAEAVLRNVARCGYDNPTPVQR
YSIPIVLSGRDLMACAQTGSGKTAAFCLPVVSGLVSAAEGGQGGEVGRGDRDAYDYDYRR
VARPLALVLAPTRELAAQINEEAKKFAHKTGLKVKVAYGGTSMVQQQLRDIEKGADILVA
TPGRLVDMIERGKISLEAIKYLIMDEADRMLDMGFEPQIRKIVDGMGMPRKSVRQTMLFS
ATFPPEIQRLASDFLSKYIFITVGRVGSSTDLITQQVEFVTHDEKRTYLIDLLQKQSFTS
SDGKPQQPLTLVFVETKREADSLRYWLYNKGFPATAIHGDRTQEERESALRSFKSGLTPV
MVATDVVARGLDVPNVAHVINYDLPKSIEDYVHRIGRTGRAGNAGSATAFFTESNHPIAK
GLLELMTEAKQNVPTWLEDYAGKPFYGGSSFGGRGRRSNGDGGSSFGGRDYRGGGDYSGY
SGGAGGGRSYSGGSGDRGDSYSGGGGGDRYSGGGTGDRYSGGGGGGGDRYSGGGGGDRYF
SGGGGGDCYSGGGGGGGDRYSGGGGGDRYSGGGGGDRYSGGGGGDRYSGGGGGDRYSGGG
GKSYSGGGGGDRYSGGGGDRYTGGGGGDSYSSGGGGKSYSGGGGGGRYSSGGGSSRESDP
PPRYYPSYPMGTSNISASGWD
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtccgacgagtggggcgacgacgcggccggcggggagtggaccaccgtcact
cgctccggccggcccagccacgccggcgcggccgggcgctcccccaacgccaagcgggcc
gctccccggccccccaagccggccgcgccgacggtgggcgaggtcggcgaggggctggcg
gggctcgacgtcgacggcgcgagccggacagggaggctggacaagtacgacataccggtg
gaggtgagcggcgacggcgcgcccgcgccggcggacgggttcgagcaggccgggctcgcg
gaggccgtgctccggaacgtggcgaggtgcggctacgacaaccccacgccggtgcagcgc
tactcgatcccgatagtgctgtccgggagggacctcatggcgtgcgcgcagaccgggtcc
gggaagacggccgcgttctgcctcccggtggtcagcgggctggtgtcggcggcggaggga
gggcaaggaggcgaagtcggtcgcggcgacagggatgcgtacgactacgactaccgccgc
gtggcgaggccgctcgctctcgtgctcgcgcccaccagagagcttgcagcgcagattaat
gaggaagcaaagaagttcgctcacaaaactggactcaaagttaaggtggcctatggagga
acttcaatggttcaacagcagctacgtgatatagagaaaggcgcagatattcttgttgct
acacccgggcgccttgtggacatgattgaaagaggaaagatctctcttgaggcaattaag
tacctgataatggacgaggctgacaggatgctggatatggggtttgagcctcagataagg
aagattgttgatgggatgggtatgccacgaaagtcggtgagacaaactatgctgttcagt
gcaaccttcccaccagaaatacagagactggcttcagactttttgtcaaagtacatattt
atcactgttgggagagtgggttcaagtactgacctaattacgcagcaagttgagtttgtc
actcacgatgagaaaagaacctacctgatagatctcttacagaaacaatctttcacttca
tctgatggcaagcctcagcagcctctaacattggtttttgtggagacaaaacgagaagct
gattcattgaggtattggctatacaacaaaggtttccctgcaacagcgatccatggtgac
agaacacaagaggagagggaaagcgcactgagatctttcaagtctggcttgaccccggtc
atggtcgccactgatgtagtcgcgcgaggcctggatgtcccaaatgttgctcatgtcatc
aactatgatcttcccaagagcatagaggattacgtccacaggattggaagaactgggaga
gctggaaatgctgggagtgccacagccttcttcactgaatccaaccaccccatagcaaag
ggattactggaactgatgaccgaggcaaaacagaatgttcctacctggctagaggactac
gcagggaagccattctatggagggtcaagcttcggcggaagaggccgaaggtccaatggc
gatggtggcagcagctttggtggcagagattatcgcggcggcggtgactattctggctac
tctggcggtgctggcggtggcaggagctactctggcggcagtggcgaccgcggtgacagc
tactccggcggcggcggcggtgaccgctactccggcggcggcactggtgaccgctactcc
ggtggcggcggcggcggcggtgatcgctactccggtggtggtggtggtgaccgctatttc
agcggcggcggcggcggtgattgctactccggtggtggtggtggtggtggtgaccgctat
tccggtggtggcggcggtgatcgctactccggtggtggtggtggtgaccgctattccggt
ggcggcggcggtgatcgctactccggtggtggtggtggtgatcgctactccggtggtggt
ggaaagagctactctggtggcggtggtggtgaccgctattctggtggtggtggtgaccgc
tacaccggtggtggtggcggtgacagctactccagcggcggtggtggaaagagctactct
ggtggcggtggtggtggcagatactccagtggcgggggctcctctagggaaagtgatcca
cctccacgctactacccttcctaccccatgggcacgtcaaacatcagcgcctctggctgg
gactag
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