Triticum aestivum (bread wheat): 123171586
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Entry
123171586 CDS
T07757
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like isoform X1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03020
RNA polymerase
taes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123171586
09124 Replication and repair
03420 Nucleotide excision repair
123171586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123171586
03400 DNA repair and recombination proteins [BR:
taes03400
]
123171586
Enzymes [BR:
taes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123171586
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123171586
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123171586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
TACC_C
DUF7069
Motif
Other DBs
NCBI-GeneID:
123171586
NCBI-ProteinID:
XP_044444970
UniProt:
A0A3B6TSH3
LinkDB
All DBs
Position
7D:complement(377466946..377475571)
Genome browser
AA seq
1859 aa
AA seq
DB search
MDARFPYSPAEVAKVKLVQFGILSPDEIRQMSVVVIEHAETMERGKAKPGGLSDPRLGTI
DRKIKCDTCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEEDTK
FKQALKIRNPKNRLRRIYDACKSKKICAGGDELEVQDQQDADEPVKKRGGCGAQQPNITV
DGMKMVAEFKATKKKSDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKYAR
PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIT
EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
EDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
LLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILRPRPIWTGKQVFNLIIPKLIN
LIRFSAWHAETESGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA
RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETIGTAKNEVKELIKQAQEKNL
EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
LDSLKMKKAEFDNVFRYELDDENWRPTYMLPDHVDDLKTIREFRNVFEAEVQKLEADRLQ
LGTEITTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVP
GDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPG
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK
PEVSKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDEDI
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFNDDNADKLILRVRIT
NDEAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKYGKVNKFDESEGFKP
DNEWMLDTEGVNLLAVMCHEDVDSTRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDY
LRGVTENIMLGQLAPIGTGGCGLYLNDQMLQQAIELQLPSYVEGLDYGMTPARSPMSATP
YRDGGMMSPMLSPNFRASPITDAQFSPYVGGMAFSPVPSNYSPSSGGGYSPSSPVFSPGP
GHGYSPTSPSYSPASPSYSPTSPSYTPGSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYS
PTSPNYSPTSPSYNPSSAKYSPSHAYSPSSPRMMSPYSQTSPNYSPTSPTYSPTSPSYAQ
PSPSYSPTSPHTTSGGPSPDYSPTSPNYSPSASYSPTAPGYSPSSTGPQTTDKDDETVD
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgaggttcccgtactccccggccgaggtggccaaggtgaagctcgtgcagttc
ggcatcctcagcccggatgaaatcagacaaatgtcagtggtggtgatagagcatgcagag
actatggagagggggaaggcaaagcctgggggtttgagtgaccctcgtttgggcaccatt
gaccggaagatcaagtgtgatacatgtatggctgggatggctgagtgcccgggtcacttt
ggccaccttgagcttgcaaagccaatgttccacatcggcttcatcaagactgtactctcc
ataatgcgctgtgtgtgcttcaactgttccaagatcctggcggatgaggaggataccaag
ttcaagcaggctctgaaaatcaggaacccaaaaaatagattaagaagaatatatgatgct
tgcaagagcaaaaagatttgtgctgggggtgatgaacttgaggttcaagatcagcaggat
gctgatgagccagtgaagaaaagaggtggttgtggtgctcagcagccaaatatcacagtt
gatggtatgaagatggttgcagaatttaaagcaacaaagaagaaaagtgatgatcaagat
caactccctgaaccagtggagcgaaagcaaattctctctgccgagagggtccttaatgtt
ctcaagcgtataagtgatgaggactgtcttttgttgggcctgaaccctaagtatgctcgt
cctgattggatgatactgcaagtccttccaattcctccaccgcctgtcagaccatctgtt
atgatggatacttcctccagaagtgaggatgatttgactcatcaattagcgatgataatt
cgacataatgagaacttgaggaggcaagagagaaatggagccccagctcacattataact
gagtttgctcagttgttgcagtttcacattgcaacgtacttcgacaatgatcttcctgga
caaccaagggccactcagcgttctggaaggcctattaagtcaatatgcagcaggctgaaa
gcaaaagaaggccggattagaggaaacttaatggggaagcgtgttgatttctcagctcgt
actgtcatcacaccagatccgaatatcaacattgatcaattgggggtgccatggagtatt
gctttgaatctgacatacccagaaactgtcactccatataacatcgagaggttgaaagag
ctagtagaatatggacctcacccacccccaggtaagacaggtgcaaagtacatcatcagg
gaagatggtcagaggctggatcttcgctatgtgaagaaaagtagtgatcagcatctggag
ctgggttacaaggtggaaagacacctcaatgatggagattttgttcttttcaaccggcaa
ccaagtcttcataaaatgtctatcatggggcatcgtattaaaattatgccgtactcaact
ttccgcctgaacctgtctgtcacatcaccatacaatgcagattttgatggggatgaaatg
aatatgcacgttcctcagtcatttgagaccagagccgaagttttagagttgatgatggtg
ccaaaatgtattgtctcgcctcaagcgaatagacctgttatgggtattgtccaggacaca
cttcttgggtgtcgaaaaataaccaaaagggacactcttattgaaaaggatgtatttatg
aacatcctaatgtggtgggaagattttgatgggaaggtccctgcgcctgccattttgaga
ccaaggccgatttggactggcaaacaagttttcaacttgattattcccaagctaatcaat
ttaataagattttcagcctggcatgctgaaacagaaagtggatttattactccaggagat
actatggtccggatagagaagggagagcttctgtctggtacactttgcaaaaaaacactt
gggacgtcaactggaagtcttattcatgttatttgggaagaggtagggccagatgctgca
cggaagttcttgggtcatacacagtggctggtcaactactggcttctgcaaaacggtttc
agtattggtattggagatacaattgcagatgctgctactatggagaagattaacgagaca
attggaacagctaagaatgaggtgaaggagcttattaagcaagcacaagagaagaacttg
gaacctgagccaggacgcaccatgatggaatcattcgaaaaccgagtaaatcaggttctt
aacaaggctcgtgatgatgctgggagtagtgctcagaagagtttgtctgagagcaacaat
ttgaaagctatggtcactgcaggctcaaaaggcagtttcattaatatttcgcaaatgact
gcttgtgtcggacagcagaatgttgagggcaagcggattccatttggttttgttgatcgt
acattgccccacttcacgaaagatgactacggccccgaaagtcgtgggtttgttgagaac
tcttaccttcgaggtctgacaccacaagaatttttcttccatgctatgggtggtagagaa
ggtttgattgatactgctgtgaaaacctccgagacgggatatattcagcggaggctcgtg
aaggctatggaggacattatggtgaaatatgatggtactgtgcgaaattctctgggtgat
gttattcaattcttgtatggagaagatggcatggatgctgtttggatcgaatcacagaaa
ttggactccctgaagatgaagaaggccgagtttgataatgtatttcgttatgaactcgat
gatgagaactggaggcctacttacatgttgcctgaccatgttgatgatttgaagaccatt
cgtgaattcagaaatgtgtttgaggcagaggttcagaaattagaagcggacagattacag
cttgggactgaaattactacaactggcgacaatacatggcctatgcctgtcaacctcaag
cggcttatctggaatgctcagaagactttcaagattgatttaagaagaccttctgacatg
cacccaatggaaattgtggaagcaatagataagctgcaagaaagacttaaggttgtccct
ggtgatgatgccatgagcatcgaggctcagaagaacgctactttgttcttcaatatcctg
cttcgtagcacatttgctagcaagagggtcttgaaagaatacaggcttacaaaggaatcc
ttcgaatgggtcattggtgagattgaatcgagattcctccagtctttggtagctcctggt
gaaatgattggatgtgtggctgcacagtccattggagaaccggcaactcagatgacactg
aatactttccattatgctggtgttagtgctaagaatgttacccttggagttcccaggtta
agagagatcattaacgttgccaagaagataaagactccatctctgtctgttttcctaaag
cctgaggtgagcaagaaaaaagaattggctaagaatgtgcagtgtgccttggagtacact
acactgcgtagtgtgacccatgccactgagatatggtatgatcctgatcctctaggaacc
atcattgaagaggatgtggaatttgtcaggtcatattatgaaatgcctgatgaggatatt
gatccggataagatctctccttggctgctgcgtattgagctgaaccgtgagatgatggtt
gataagaaattgagcatggctgatattgcagagaagatcaatcatgaatttgacgatgac
ttgtcatgcatattcaatgatgataatgcagataagctcatccttcgtgtccgcattaca
aatgacgaagctccaaaaggagaaatacaggatgaatctgctgaggatgacgtcttcctc
aagaagattgagggtaatatgttgactgagatggcccttcgaggcattccagatattaac
aaggtcttcatcaaatacgggaaggtcaataaatttgatgaaagtgagggtttcaaacca
gataacgagtggatgcttgatacagaaggtgtaaacctcttggccgtgatgtgccatgag
gatgttgattctacaaggacaactagtaaccatttgattgaagtgattgaggttcttggg
attgaggctgtccgcaggtctctcttggatgagctgagggtggttatatcttttgatggg
tcttatgtgaactacaggcatctggccattctctgtgatacgatgacatacagaggtcac
ctgatggctattactaggcatggtataaatcgtaatgacacagggcccctcatgagatgt
tcttttgaagaaacagtggatatcttgcttgatgctgctgtatatgcggaatctgattac
ctgagaggtgtgactgagaacattatgcttggccagcttgctcctattggtacaggaggc
tgtggattgtatctgaatgaccagatgctgcagcaggccattgagcttcagcttccaagc
tatgttgaaggtctggactatggcatgacaccagcgcgttcacccatgtccgcgacaccg
taccgtgatggaggaatgatgtcaccaatgttgagtccaaatttcagggcttccccaatt
acagatgctcagttctcaccatatgttgggggcatggcattctcacccgtcccgtcaaac
tacagcccatcctctggaggtggttacagtccatcttctccggtgttcagcccagggcca
ggacatggttacagtcccacttctccatcatacagccctgcatcgcccagctacagcccc
acctctccatcatatacgcctggctctccttcctacagcccgaccagtccatcatactct
ccgaccagtccatcatactcgccaacatccccgagctacagccccacatctcctagctac
agccccacatctccgagctacagcccaacatcaccaagctatagccccacatcgccgagc
tatagtccaacatcaccggtttatagtccgacctcgccagcatacagcccgacatctcct
gcatacagcccgacgtcgccatcttacagcccaacgtcgccatcatacagccctacttct
ccctcatacagcccgacatcgccctcatacagcccgacatcaccctcatacagccccacg
tcgccctcatacagccccacgtcgccctcatacagccctacctcgccctcatacagccct
acatcgcctgcatacagccctacatcgcctggctacagcccgacgtcaccgagctacagc
cctacttccccgaactacagccccacttcaccgagctacaacccttcttcggccaagtac
agtccttcacatgcttattctccaagcagcccaaggatgatgagcccgtacagtcagact
tctccgaactacagcccgacctcaccgacctactcgcccacctcaccatcatatgcgcaa
ccaagcccgtcatacagcccgacaagcccgcacactacctctggaggacctagcccagat
tacagcccgacatctccaaactacagccccagcgcaagctactccccgactgcaccgggc
tactccccgtcatccaccggcccgcagacaactgacaaggacgatgagactgttgactag
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integrated database retrieval system
