Triticum aestivum (bread wheat): 123172141
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Entry
123172141 CDS
T07757
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit C-like
KO
K07466
replication factor A1
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03030
DNA replication
taes03420
Nucleotide excision repair
taes03430
Mismatch repair
taes03440
Homologous recombination
taes03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123172141
03420 Nucleotide excision repair
123172141
03430 Mismatch repair
123172141
03440 Homologous recombination
123172141
03460 Fanconi anemia pathway
123172141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
taes03000
]
123172141
03032 DNA replication proteins [BR:
taes03032
]
123172141
03400 DNA repair and recombination proteins [BR:
taes03400
]
123172141
Transcription factors [BR:
taes03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123172141
DNA replication proteins [BR:
taes03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
123172141
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
123172141
MMR (mismatch excision repair)
123172141
DSBR (double strand breaks repair)
HR (homologous recombination)
123172141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
zf-CCHC
REPA_OB_2
Rep-A_N
zf-CCHC_2
tRNA_anti-codon
zf-CCHC_5
zf-CCHC_3
DUF223
CDC24_OB3
DUF936
NKWYS
Motif
Other DBs
NCBI-GeneID:
123172141
NCBI-ProteinID:
XP_044445097
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MEGPPRLTAGAVREIWELPDGPGTIQPVLQVADLRAVTTKNPVGHQSERYRMLLSDGVHS
QQSMLSTNHNHLVKTGALRQGSIVHLQDITCNTIQNRRIIIVVELDVLLSECDLIGKPRI
YEKSLSAGQVPNLPASAAQANSGNHTNGPGMLGNCVAPRVEQSTNNQSYGGPYNGVHSPA
DPSIGRTLQPGPNNVSSGGSYGTMPAQNTMNGGNMAQPNSQRPYNGVHSPVGPSIGRTVQ
PGPNNVSPGGPYGAMSAQNTMNGNMVQPNSQRPLLNSHQNQRFAIPGTGGGISPPGNVYG
RPAQPSYQQPPPAYTNNGPAAKNGAALRTVPISALNPYQRTWTIKARVSAKSQVKHYNNA
RGPGKLFNFDLRDAHGGEIRAVCFNTQLDQFYDLIEVDKVYLISRGSLKPANKQFNHLNN
DYEVSLDAATTIEVCSDDDSSIPRQQFDFRQISEIANMDKDTMVDLLGVVTSVSPSSPFT
RKDGVETQKRVLQLRDMSGCSVEITFWGGFCNAEGQQLQSLCDSGSNPVLALRSVRVGEF
KGRNVSTIGSSFLKINPDFPAAESLRQWYITEGKNAACTSLSMGGSGMGRTDDRKTVEQI
KAENLGRSEKPDWITVKGAISHISTDNFCYPACTTEVNGTRCNKKVTNNGDGMWQCDKCE
QSTPNCEYRYMLQCQIQDYTGTSYATAFHDAGKDIIGLPAQDLYSIKHEDQDDEKFADII
QKVRFELFLFKLKVKEEVFNDEPRVKCYIVNAQKLEDTSKESRFLLGPIDSLLVDDGLGP
TPGVSGAAAVNTGFTSNTGTYSTNMSGPNQFGQRTSSSSMVPATPSATRYSQNCSVCGST
GHSVQNCPAVAMDMQQPAASGYAASSYGSSPGDAGSGLCFKCNQPGHFSRDCPQQEATSY
RSPAANANANSGLCYKCNQPGHFSRDCPGQAANSYDASAGGNAGAGGLCFKCNQPGHFSR
DCPGQAANSYGASAGGNAGATGLCYKCNQPGHFARDCQGQAAAPQRQAYGNGAASGGYNR
QSYVGSF
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggaggggccgccgcggctgacggcgggggcggtgagggagatatgggagctgccggac
gggccggggaccatccagccggtgctgcaggtggcggacctgcgcgccgtcaccaccaag
aaccccgttggccaccagtcggagcgctaccgcatgcttctctccgacggcgtccactcc
cagcagtccatgctctccaccaaccacaaccacctcgtcaagaccggcgccctccgccaa
ggctccatcgtccacctccaggacatcacctgcaacaccatccagaaccgcaggatcatt
attgttgtcgaacttgatgttctgctaagtgagtgtgacttgatcgggaagccaaggatt
tatgagaaaagcttatctgcgggacaggtgcctaacttaccagccagtgctgctcaagca
aatagtggaaaccataccaatggtccaggcatgctgggcaattgtgttgccccaagggtg
gagcagagtactaacaatcagtcgtatggtgggccctacaatggtgttcacagcccagcg
gacccttctattggtcggacactccaacctggacctaacaacgtgtcgtctggtggatct
tatggtacaatgccagcacagaacacaatgaatggtggcaatatggctcagccaaactct
cagcggccttacaatggtgttcacagcccagtgggcccttctattggtcggacagtccaa
cctggacctaacaatgtgtcgcctggtggaccttatggtgcaatgtcagcgcagaacaca
atgaatggcaatatggtgcagccaaactcccagcggcctttactgaactctcatcagaac
caaaggtttgcaattcctggcacaggtgggggcataagcccccctggcaatgtttatggg
cgccctgctcagccttcgtatcagcagccacctccagcgtatacaaataatggcccagct
gctaagaacggggctgcccttcgcaccgttccgatttctgcactgaacccttaccaacgt
acatggacaataaaggctagggtgtctgccaagagtcaggtcaagcactacaacaatgca
agaggtccaggcaaactcttcaactttgatctccgtgatgcacatggtggagaaattcgt
gcagtatgctttaatacacagttggatcagttctatgacctgattgaggttgataaagtg
tacttgatatctagagggtcactgaagcccgcaaataaacagtttaaccatttgaacaat
gactacgaagtctctctggatgctgcaacaactatagaagtttgttctgatgatgatagc
agcatccctaggcagcagtttgatttccgacagatcagcgaaatagctaacatggataaa
gacaccatggtggatttgcttggggttgttacgtcagttagcccttcttctccatttaca
cggaaggatggtgtggaaacccagaaaagagtccttcaactgagggacatgtctggttgc
agtgtggaaataaccttttggggtggcttctgtaatgctgaaggacagcagctgcagtcg
ctgtgtgattctggttcaaatcctgtgcttgccctgagatctgtccgtgttggtgaattc
aagggcagaaatgtaagcacaattggctcaagcttcttaaaaataaatccagacttccct
gctgccgaaagtctgaggcagtggtacataactgaagggaaaaacgctgcttgcacttct
ttatctatgggagggtcaggcatgggccggactgatgaccgaaaaactgttgagcagatc
aaggctgaaaacttggggagatcagagaagcctgattggatcactgtcaagggtgcaatt
tcacacatcagcactgacaacttctgttacccagcttgcaccacggaggttaatggtaca
cgctgcaacaaaaaggtgacgaataatggcgatggtatgtggcaatgtgacaaatgtgag
cagagcactccaaattgcgagtataggtacatgctccagtgtcaaatccaggattatacc
gggaccagctatgcaactgcattccatgacgctggcaaggatataattggcctcccagca
caagatctgtacagtataaagcatgaagaccaagatgatgagaaattcgcagacatcata
cagaaggtccgttttgagctattccttttcaagctgaaagtcaaggaagaagtgtttaat
gatgaacctcgggtgaaatgctacattgttaatgctcagaaattggaggacacgtcgaaa
gagtctcgctttctactgggaccaattgatagccttttggtggacgatggcttaggtcca
acccctggggtgagtggtgctgctgctgtcaacactggtttcacctccaacactggtacc
tacagcacgaatatgagtggcccaaatcagtttgggcagcgaacgagctcatctagcatg
gtgcctgccacaccatcagcgacacgatattcacagaactgcagtgtttgtgggtccact
gggcatagtgtgcagaactgccctgcagtggccatggatatgcagcaaccagcagcaagc
ggctacgcggctagttcctatggctcttcacctggtgatgccggctcgggtctgtgcttc
aaatgcaaccagcccgggcacttctccagagactgtccacagcaggaggctacctcctac
aggtctccagccgccaacgccaatgccaactcgggtctgtgctacaaatgcaatcagcct
gggcacttctccagagactgcccagggcaggcggctaactcctatgacgcctcagctggt
ggcaacgccggcgcaggtggcctgtgcttcaaatgcaatcagcctgggcacttctccaga
gactgcccagggcaggcggctaactcctacggtgcctcagctggaggcaacgccggcgca
actggcctgtgctacaagtgtaaccagcctgggcactttgccagagactgtcaggggcag
gctgctgccccccagcgccaggcttacgggaacggtgccgcatcaggagggtacaaccgg
cagtcctatgtcggtagcttctga
DBGET
integrated database retrieval system
