Triticum aestivum (bread wheat): 123179815
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Entry
123179815 CDS
T07757
Name
(RefSeq) vacuolar sorting protein 3-like
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123179815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
taes04131
]
123179815
Membrane trafficking [BR:
taes04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
123179815
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-Vps39_C
Vps39_1
CNH
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
123179815
NCBI-ProteinID:
XP_044447641
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Position
1D:5955215..5961689
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AA seq
940 aa
AA seq
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MGSQPGPSRAALEPFATLDPAALASLPASTPLTVRSAALSAPSLLYIGTGGGKLLLFSLA
TPSSPEFLRLLPIGATRPVSAIFPLPSVARVLVLADGMLLLADPLLARPVRRLGSLRGVA
AVAASPPASSQSSCSLAVAVGKRLLVLDLALREADELEVQTREIAAGVEGISALAWVGED
SVFAGTASGYSLFSSSGGAGQRTDIFTLPESAGAPRIRPLSGGQEVMLLVDNVGVVVDQS
GQPVGSSFVFNSRPDCIVEVFPYVVVAAESKVDVYRRRNGVHLQTVPIARRGTGVLTVAS
DGDGSGGEVVVVATAYKVFCYRKVSAVEQIKALLRIKSYTEAISLLEEFESDGEISNDMI
SFVHAQLGFLLFFDLRFEDAVNHFLLSETMQPAEIFPFIMRDPNRWSDLVPRKRYWGLHP
PPKPLEEVIDDGLVTLQRALFLKKAGVDTVVDEDFLSNPPTRADLLELAIRNIIRYLCVS
REKSLSPAEMEGVDTLLMYLYRALDLVDDMEKLASSQNSCVVDELESLLDNSGHLRTLAF
LYGSKGMCSQAVAIWRILARNYSTGLWKDRPNLPGTDSQETSADKKSGEEIAAIEASKIL
QATSDQDLVLEHLGWVADIDQDLATAILTSEMREKQLSSEKVIAALDSEKVGIHQRYLQW
LIEDQGCEDPHYHTSYALLLSKSAMEAFHMESNSGEKNDKEIDSDIQFIYSLRERLQLFL
QASDLYDPEDVLDVIAESELWLEKAILYRKMGQENIVLQILALKLEDSEAAEQYCAEIGR
DDAYIQLLDLYLDPKNGREPMFTAAVRLLHNHGKSLDPIQVLERLSSDMPLQLASDTILR
MLRARVHHHRQGQIVHNLSRATNVDARLTRLEERSRHVQLTDESICDSCRARLGTKLFVM
YPDDSVVCYRCYRNQGDSVSARGRNFRKDAIFKQSWLVSR
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgggatcccagccggggccctcccgcgcggccctggagcccttcgcgacgctggacccg
gcggcgctggcctccctcccggcctccacgcccctcaccgtccgctccgccgccctctcc
gcgccgagcctcctctacatcggcacgggcggcgggaagctcctcctcttctccctggcg
accccctcctcccccgagttcctccgcctgctccccatcggcgccacccgccccgtctcc
gccatcttcccgctcccctccgtcgcccgcgtcctcgtgctcgccgacggcatgctcctc
ctcgccgacccgctcctcgcgcgccccgtccgccgcctcggctccctccgcggcgtcgcc
gccgtcgccgcctccccacccgcctcctcccagtcctcgtgctccctcgccgtcgcggtc
gggaagaggctgctggtcctcgacctcgccctgcgcgaggcggacgagctggaggtgcag
acgcgcgagatcgccgcgggggtcgaggggatcagcgcgctcgcctgggtgggcgaggac
tcggtcttcgccggcaccgcgtcggggtactcgctcttctcctcgagcggcggcgcgggc
cagcgcacggacatattcaccctcccggagtcggccggggcgccgaggatcaggccgctg
tcgggcggccaggaggtgatgctgctggtggacaatgtcggggtggtcgtcgaccagtcc
gggcagcccgtcggaagcagcttcgtgttcaacagcaggcccgattgcatcgtcgaggtg
ttcccgtatgtggtggtcgccgcggagtccaaggtggatgtgtacaggaggaggaatggg
gtgcacttgcagaccgttccgatcgcgaggagaggcacgggtgttctgaccgtggcgagc
gacggtgatggaagcggcggggaggtcgttgtggtcgctacggcttataaggttttttgt
taccgtaaagtatctgcagtggaacagatcaaggcgttgttacgaataaagagttataca
gaggctatttctttgctggaagagtttgaatctgatggtgaaatctcgaatgatatgatt
tcctttgtgcatgcacaacttggattcttattattctttgacttgcgctttgaggatgct
gttaatcatttcttgctgtcggagactatgcaaccagcagaaatatttccattcatcatg
cgggatcctaatcgttggtcagatctggtgccaagaaagcgttattggggcttgcatcct
ccccccaagcctcttgaagaagttattgacgatggactggtaacacttcagcgagcattg
tttctcaaaaaggcaggtgtggacacagttgtggatgaagatttcctttcaaatcctcca
actagagctgatctgttggaactagctatcagaaatattatcaggtacctttgtgtttcg
cgagagaagagcttgtctcctgcagagatggaaggagtcgatactcttctgatgtacctt
tatagagcacttgatcttgttgatgacatggagaagcttgcatcatctcaaaatagctgt
gttgtggacgaactggaatcactcttggacaactctggacatctgcggacgcttgctttc
ttatatggcagtaagggaatgtgctcccaagctgttgctatctggcgtatcttagcaagg
aattacagcacaggtttgtggaaggaccgtcctaatctgcctggaacggactcccaggaa
acttcggctgataaaaaatctggtgaggaaattgctgctatcgaagcctccaagatactt
caagcaacatctgatcaggaccttgttttggaacatcttggatgggttgcagacattgat
caagaccttgcaactgcaattttaacatctgagatgagggaaaaacagctttcttctgaa
aaggttattgctgcccttgattcagaaaaggttgggattcaccaaagatatttgcagtgg
ttgattgaggatcagggttgtgaggaccctcactatcacacgtcatatgcactattgctg
tcgaaatctgccatggaagcatttcatatggagtccaattccggagagaaaaatgataaa
gaaatcgactcggacatacagttcatttattcattgagggaaagattgcaattatttttg
caagcttcggacttgtatgatccagaagatgtgcttgatgtgatagcagaatctgagcta
tggctggaaaaggccattttgtataggaagatgggccaagagaacattgtacttcagata
ctagcactgaaactggaggatagcgaagctgctgagcagtactgtgcagagattggtcga
gacgatgcttatattcagcttttggatttgtatttggacccgaaaaatgggagagaaccg
atgtttacagcagctgtccgacttcttcataatcatgggaaatctttggatcccatacaa
gtattggagagattatcctcagatatgcctctccagctagcttcagatacaatattgcga
atgctaagagctcgggtgcaccatcatcgccaagggcagatagttcataatttatcacgc
gcgacgaacgttgatgcacggttgacaagattggaggagaggtcaaggcatgtgcagcta
accgatgagagtatctgcgattcatgtagagctcggcttggcaccaagctattcgtcatg
tacccagatgactcggttgtttgctacaggtgctaccgaaaccaaggcgattctgtctcc
gcacggggccgtaacttcaggaaagatgctatattcaaacaaagctggctcgtcagtaga
tag
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