Triticum aestivum (bread wheat): 123180238
Help
Entry
123180238 CDS
T07757
Name
(RefSeq) rRNA biogenesis protein RRP5-like isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
taes03009
]
123180238
Ribosome biogenesis [BR:
taes03009
]
Eukaryotic type
90S particles
Other 90S particles
123180238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
OB_RRP5
Spt6_S1
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
123180238
NCBI-ProteinID:
XP_044448154
LinkDB
All DBs
Position
1D:53132382..53151574
Genome browser
AA seq
1898 aa
AA seq
DB search
MAPHGDRKKGKGADRPGKPGLGPNRKEFKNHRKEEGEKAGGAEEQEQEQQPAPHPAALFN
AADDGDFPRGGRSLLSRDEMAEARTEAEVEFEKEERRGKKKRKANVSSGIDGDDDLGTLF
GGATTGKLPRFANRITLKNISPSMKLWGVVIEVNQKDIIVSLPGGMRGFVRTEEVSDIAL
HGNSKDNEGSVCAEVVHVGQLVPCMVLQVDDDKKEGKAHKRVWLSLRLSRMYKGLSLDAI
QDGMVLTAQVKSVEDHGYILYFGVSTFSGFMPKAGKETVKIESGQLIQCVVKGIDKARSI
IHLSSDEDLISKSIIKDLKGLSIDHLIPGMMMSARVHSVLENGVMLSFLTYFTGTADIFN
LSSSFPSGNWKDDYSKNKKVNARILFVDPSTRAVGLTLNQHLLRLNVPPINVKVGEIYDK
SRVLRVDKKAGLFLEIPSPTPSPGFVSIHDVSDKDVKNVEKKFREGSLTRVRVLGVRHLE
GVALGTLKDSAFEGSVFTHADVKPGMVVRAKVVTVEPFGAIVQFSSGVKALCPLPHMSEL
DNIVKPPKKFKAGAELLFRVLGCKSKRITVTYKKSLVKSKLEVLASYADAKIGLVTHGWI
TKIEKHGCFVRFYNGVQGFVSRSELGLEPGIEAESVYHVGQVVKCRIVSVVPTSRKLYVS
FTMSSNRVIQADTAKVGTIVSGVVERLTPATVVVSVNGFSKGSILNEQLADHHGQAAQLK
NLLKPGHEFNQLLVLDTEGQNLVLSAKHSLINTANDIPSEISQMQAGAVVHGYICNIIEA
GCFVRFLGHLTGFSPKDKAVDRPIEKLSDVFCVGQSVRSHVLNVNAESARVKLSLQQSMC
SSPDCSFIQGYFLLDQKIAALKYSGPSTSHDWVKYFGIGSLVKGEVGAIEEYGVILNFKD
HPDVVGLIEHHQLGGSTVKVGSSVKGLVVDLSDGVVNLSLKPELVGSVSKDGKKKKRHRA
AVLDLELREEVNAVVEIVKDSYVVLSVPEYNHAIGFAPLMDYNSQLLPQHHYDNGQCITV
VVGSIPSSDPSGRLILLPKGSAQDSNISSSKRAKKKSDYKVGSLVEAEIIDIKPLEVILK
FGVNLHGRIHITEVLEEDCSEHPFSKLKIGQKVHARIVAQAEHSAKTGRNLKWELSIKPS
LLKADLEESTASEAELNHSINDIIRAYVVKVDAEWVWLTVSRKVMAHLFILDSSVEPSEL
KEFQQRYSVGQAVKGRIIGVNREKRLLRLKAFDNQCMLENIDDTQKTVSSIAEHTKEGDV
IGGRIQRILPGVGGLVIQIGPHLHGRVHYTEIVDLWVPEPLSGIHEGQFVKCKVLAVSRQ
AEGSVRVDLSLRSRKLGDSTTCAPRFEKINDLCPGTEVKGYVKNVNPKGCFIMLSRMVEA
RIILSNLSDEYVENPQKDFSVGMLVQGRVLSAEPLSGKVEVSLRKSTGSKSQKLDDVSYS
DLHVGDIVDGQVKRVESYGLFVTIKSSELVGLCHVSELSDEPVLDINACYKAGDIVKAKI
LKIDEDRHRVSLGLKESYFDSDLTDDENGNENDGGRVPMDISRAPQMSGGFNSTLVLPGP
EPRASVPPLQVALDEYEGSDQEGDQKAHEIANGSEPNVKKSDRRLKEKARKQREIEISAL
EERALQKDIPQTPDEFEKLVRTSPNSSFVWIKYMAFLLDLADVEKARSVAERALRTINIR
EEEEKLNVWVAYFNLENEYGSPREDAVKKIFQRALQYCDPKKVHLALLGMYERTKQNELA
DELFDRMTKRFKTSCKIWLRRIQFSLTQGKDVEYIKSVVNRALLSLPQNKRIKFLTQTAI
LEFKCGVAEEGRSRFELILREYPKRTDIWSVYLDQEIRLGDTEIIRALFDRVTCLSLPPR
KMKFLFKKYLRYEKAQGDEERIKHVKQKAMEFVEICRA
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcacggcgacaggaagaaggggaagggcgcggaccgcccgggcaagccgggg
ctgggccccaaccgcaaggagttcaaaaaccaccgcaaggaggaaggggagaaggcgggc
ggcgcagaggagcaggagcaggagcagcagccggcgccgcacccggcggctctgttcaac
gccgccgacgacggtgacttccccagaggagggcgcagcctcctgagcagggacgagatg
gccgaggcgcgcaccgaggccgaggtggagttcgagaaggaggagaggagggggaagaag
aagaggaaagccaacgtctcttcaggaatcgacggcgatgatgacctcgggaccctcttc
ggcggggctaccactgggaagctcccacgcttcgccaatcgcatcaccttgaagaatatt
tcaccaagcatgaagctttggggtgttgtaatcgaagttaaccaaaaagacattatagtg
agtctacctggcggaatgagagggtttgttcgcacagaggaagtttcggacattgctttg
catggaaatagcaaggataatgagggcagtgtatgtgctgaagttgttcatgttggtcag
ctggtaccttgtatggttctgcaagttgatgatgataagaaagaaggaaaagcacacaag
cgggtttggttatcattgcggttgagccggatgtacaagggtctttctctggatgctatc
caggatggaatggtgctcactgctcaagtgaaaagcgtcgaggaccatggttacattctt
tatttcggagtatccacatttagtggatttatgccaaaagctggcaaagaaactgtgaag
attgagagcgggcaactcatacaatgtgtcgtgaaggggattgataaagctcgctctatt
attcacttgagttctgatgaagacttgatctctaaatccattattaaagatctgaaaggc
ctttccattgatcatctaattcctggcatgatgatgagtgcacgtgttcattcagtcctt
gaaaatggagttatgctatcatttcttacttacttcactggaacggctgatatttttaat
ttgtcgagctccttcccttctggtaattggaaagatgattacagcaagaataagaaggta
aatgcccgcatcttgtttgttgatccgtcaacaagagcagttgggcttacattgaaccaa
cacttacttcgtcttaatgtaccccctattaatgttaaagttggagaaatatatgacaaa
tcacgggtgctgagggtggataaaaaagctggtctttttcttgaaataccttctccaact
ccatcacctggatttgttagtatacacgatgtatcagacaaggatgtgaagaatgtggag
aagaagtttagggaaggcagcttgacacgtgtccgtgtacttggagtgcgacatcttgaa
ggagttgcactaggcacactaaaagacagtgcttttgaaggttctgttttcactcatgct
gatgtcaaaccaggaatggtagtgagagctaaggttgttactgttgagccttttggcgca
attgtgcagttttcaagtggtgtgaaagcactttgtccacttcctcacatgtctgagtta
gataacattgtaaagccaccgaagaaatttaaggctggagctgaactactttttcgtgtt
ttgggttgcaaatccaagagaataacagtgacatacaagaagtctctggtcaaatcaaaa
cttgaagtgttggcctcgtatgctgatgccaagattggtttagtgactcatggatggatt
actaaaatagaaaagcatgggtgcttcgtgagattttacaatggagttcaggggtttgtt
agcagatctgaacttggactagagccaggcattgaagctgaaagtgtttatcatgttgga
caagttgtcaaatgtagaattgtaagcgtggtccccacttcaaggaaactatatgttagt
tttacaatgtcttctaatagggtcattcaagctgatactgcaaaggtgggtacaattgtc
tctggtgttgtggagcgacttactcctgcaactgttgtggtcagtgtcaatggcttctcc
aagggatctatacttaatgaacagttggcagatcatcatggccaagctgctcagttgaag
aatttgttgaagcctggccatgagttcaaccagcttttagttcttgatactgaaggccaa
aatttagttctttccgctaaacactcacttatcaacactgcaaatgacattccatcagag
atatcacagatgcaagcaggagctgtagttcatggttacatttgcaacatcatcgaagct
ggttgttttgttcgctttcttggacatctaactggtttctctcccaaggataaagcggtt
gacaggccgatagaaaagctttctgatgtgttctgtgttggccaatcagttcgtagtcat
gtcctcaatgtgaatgcagaatctgctcgagtaaagctttcactccaacagtccatgtgc
tcttcacctgattgttcatttattcaaggatattttcttctcgatcagaagattgccgca
ttgaagtattcaggtcctagtacttctcatgattgggtgaaatattttggcattggtagc
ttggttaagggtgaggtgggagcaatagaagaatatggtgttatccttaacttcaaagac
catccggatgttgttggtctaattgaacatcatcagcttggtggcagtactgtaaaagtg
ggttcttctgtgaagggtcttgttgtggatttatctgatggagttgtaaatttatcgctt
aaacctgaactagttggcagtgtcagcaaggatgggaaaaagaagaaacgtcacagagct
gcggttttggacttggagcttcgggaagaagtcaatgcagttgtggagatagtcaaagac
agctatgtggttctttctgtccctgagtataatcatgcaataggctttgcaccgttgatg
gattacaactcacaattgcttcctcaacatcactatgataatgggcagtgcattaccgtt
gtcgttggaagtatcccaagttctgacccttctggaagacttatccttctcccgaaagga
tcagcccaggattctaatatctctagttctaaaagggctaagaagaaatcagactacaaa
gttgggtcacttgttgaagcagagattattgatatcaagccgcttgaggttattttgaaa
tttggtgtcaatcttcatggaaggattcatattactgaggtccttgaagaagattgcagc
gagcatccctttagtaaactcaaaatcgggcaaaaggtccatgcaagaattgttgcacaa
gctgaacattcagcaaaaactggcagaaatttgaaatgggaactatctattaagccatcc
ttgcttaaagcagacttggaagaatcaactgcatctgaagctgaattgaatcactcaatt
aatgacatcatacgtgcttatgtcgtcaaggtggatgcggaatgggtctggttaactgta
tccagaaaggttatggcacatttatttattcttgatagttcagttgagccgagcgaacta
aaagagttccaacagcgttatagtgtcggtcaagcagtgaaaggacgcattattggggtg
aacagagagaaaaggttgttgaggctgaaagcgtttgataaccaatgcatgctcgagaat
atagatgacacacaaaaaacagtatcttctattgctgaacacacgaaggaaggagatgtc
attggtggacgcatccaaaggattctacctggtgttggtgggcttgtcatccagattgga
cctcatcttcatggaagagttcattatactgaaattgttgatttgtgggtacctgaaccc
ctatctgggatccatgaaggtcaatttgtaaagtgcaaggtcctggctgtaagccgccaa
gctgaaggatctgtccgagttgacctatcacttcgctcaagaaaacttggtgattcgaca
acttgcgctccccggtttgagaagatcaacgatctgtgccctggtacagaggttaagggt
tatgtgaagaatgtgaatcccaaagggtgtttcatcatgctttctcgaatggttgaggct
aggattattttgtcaaatctgtcagatgagtatgtcgaaaatcctcagaaggatttctca
gttggaatgcttgtacagggaagggtattgtctgcggaaccactatcagggaaagttgag
gtatcacttaggaagagcactggtagcaaatcacagaagttggatgatgttagctacagt
gacctgcatgttggggacatcgttgatggtcaagttaaacgggttgaatcctatggatta
tttgtgacaatcaagagcagtgaactggtgggcttgtgtcatgtatcagaactttctgat
gaaccagttcttgatatcaacgcttgctacaaagctggcgatattgttaaagctaaaatt
ttgaagattgacgaggatcgacaccgagtatcccttggccttaaggaatcttactttgac
tctgatctgactgatgatgaaaatggcaacgagaatgatggtggaagggttcccatggac
atcagccgtgcccctcagatgtctggaggttttaacagcactttagttcttcctggacct
gaacccagggcttctgttcccccacttcaggtcgccttggacgaatacgaaggttctgac
caagagggtgatcagaaagctcatgaaattgctaatggaagtgaaccaaatgtaaaaaag
agcgatagacggttaaaggagaaggcgagaaaacaaagggaaatagaaatcagtgccttg
gaggaaagggctttacagaaagatataccacagactccagatgaattcgaaaagttggtg
aggacctctccaaatagtagcttcgtctggataaagtatatggcatttttgttagacctt
gcggatgtcgagaaagcacgttcagtagctgaaagggctttgagaacaataaacattaga
gaggaggaggagaaactcaatgtatgggtagcatacttcaaccttgaaaatgagtacggg
agtccacgggaggatgctgtcaagaagatattccaaagagccctgcagtattgtgatccc
aaaaaggtgcacttggctcttcttggaatgtacgagaggactaaacagaatgaactggca
gatgaactgtttgatagaatgaccaaaagattcaaaacttcgtgcaagatctggttgcgc
cgcattcagttctctctcactcaaggcaaggatgttgaatacatcaaatctgtcgtaaac
cgtgcgcttcttagtctgccacaaaacaagcgtataaagtttctcacgcagactgctatc
ctggagttcaagtgtggggtggctgaggaagggagatccagatttgagctgatcctaagg
gagtatccgaaaagaacagatatttggagtgtttacctagaccaggaaattcgacttggt
gacacggaaattatacgggcattatttgatagggtgacatgccttagtcttcctccaaga
aagatgaagttcttgttcaagaaatacctgcgatatgagaaggctcagggcgatgaagaa
agaatcaagcatgtgaagcagaaggcaatggagttcgttgagatttgtagagcctga
DBGET
integrated database retrieval system
