Triticum aestivum (bread wheat): 123180384
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Entry
123180384 CDS
T07757
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit C-like
KO
K07466
replication factor A1
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03030
DNA replication
taes03420
Nucleotide excision repair
taes03430
Mismatch repair
taes03440
Homologous recombination
taes03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123180384
03420 Nucleotide excision repair
123180384
03430 Mismatch repair
123180384
03440 Homologous recombination
123180384
03460 Fanconi anemia pathway
123180384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
taes03000
]
123180384
03032 DNA replication proteins [BR:
taes03032
]
123180384
03400 DNA repair and recombination proteins [BR:
taes03400
]
123180384
Transcription factors [BR:
taes03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123180384
DNA replication proteins [BR:
taes03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
123180384
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
123180384
MMR (mismatch excision repair)
123180384
DSBR (double strand breaks repair)
HR (homologous recombination)
123180384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
zf-CCHC
tRNA_anti-codon
zf-CCHC_2
zf-CCHC_3
zf-CCHC_5
DUF936
DUF223
RMI1_C
BRCA-2_OB1
Motif
Other DBs
NCBI-GeneID:
123180384
NCBI-ProteinID:
XP_044448364
LinkDB
All DBs
Position
1D:complement(73785074..73793467)
Genome browser
AA seq
880 aa
AA seq
DB search
MEAPPPLTAGAVTEIWELPNGPATFQPVLQVADLRPVVAKNTTAAAAAAQHSERFRMLLS
DGVHSQQSMLGTGLNDLIKDGTLRVGSIVHLTDMTCNTIQKRRIVIVVKLEVLQSECPKI
GTPKIYEKSLPEEQEPNLPANPAQTNSGNYSGPGMLGSAVAPRVEQIGNNLSYGRPNNGG
PGVDSSICQSVQPGANNVLSGGTYGAMSAHNTMNANVVHPNSHQNQSFAVPGTGGGFGPP
GNIYGRPAQPSYQQPPPPHRNSGPVAKNEAASRVIPISALNPYQRTWTIKARVTAKVHVK
NFNNARGPGKVFSFDLLDANGGEIRATCFGVAVDQFYDLIEVDKVYLVSRGSLKPANKRF
SPLNNDYEINLEPSSSIEVCSGDDSSIPKQQFNFRQISEIANMDKDTTVDLLGVVTSVRP
SFTVMLKNGGETQKRVLQLKDMSGCSVEMTFWGNFCDAEGQQLQSLCDSGLNPILALKSG
RVGEFNGKTVSTTSSSLLKINPDFPEAERLRQWYITEGKIAACTSLSGEMSSMGRTDVRK
KTAQIKDERLGQSEKPDWITVQGAISQIYTDNFCYPACTREVNGKSCNKKVTNNGDGMWL
CEKCDQSSETCEYRYLLSCHIQDHTGFTHATSFQEAGQEIIGLSAQDLFRIKHEEQDDVR
FAEIIQQVRFQQYLFKLRVKEEVYNDEPRVKCNIVKAERYDPVKESRFFLGAIDSLLAED
TSGSSPGLNGGPAVNAGFANSEAGQSVPASNNSYAVNMGGPNQFGQQFSASIGMPAAPSA
TPAAGSGFAPNSYGPSAANASSGLCFKCNQPGHFSRDCPGQAAPYSSSAGGNANTGLCFK
CNQPGHFARDCPAQAAGHQRQTYANGAAAGGYNRQSYVGS
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccgccgccgctgacggcgggcgcggtgacggagatatgggagctcccgaac
gggccggcgacgttccagccggtgctgcaggtcgcggaccttcgccccgtcgtcgccaag
aacacgaccgcggcggcggccgcggcgcagcactcggagcggttccgcatgctgctctcc
gacggcgtccactcccagcagtccatgctcggcaccggcctcaacgacctcataaaggac
ggaaccctccgcgtcggctccatcgtccacctcacggacatgacgtgcaacaccatccag
aaacgcaggatcgttattgttgtcaaacttgaagttctccaaagtgagtgccccaaaatt
gggacaccaaagatttatgagaaaagcttacctgaggaacaggagcctaacttaccggcc
aatcctgctcaaacaaacagtggaaactattctggcccaggcatgctggggtctgcagtt
gctccaagggtggaacagattggtaacaatctgtcatatggtagacccaacaacggtggc
ccaggtgtggactcttcaatttgtcagtctgttcaacctggtgctaacaatgtgttgtct
ggtggaacttatggtgcaatgtcagcacataacacaatgaatgccaacgtggtgcaccca
aactctcatcaaaaccaaagttttgcggttcctggcacaggtgggggctttggccctcct
ggcaatatatatgggcgccctgcacagccttcatatcagcagccacctccaccccataga
aatagtggcccagttgctaagaatgaagctgcttctcgtgttattccaatttctgcactg
aacccataccaacgtacatggacaataaaggctagggtgactgcgaaggttcatgtcaag
aacttcaataacgcaagaggtccaggaaaagtcttctcctttgatctccttgatgcaaat
ggtggagaaattcgtgcaacatgctttggcgtggcagttgatcagttctatgacttaatt
gaggttgataaggtgtacttggtatctaggggatcgctaaaacccgcaaacaagaggttt
agccctttaaacaatgactatgaaataaaccttgagccttcatcatctatagaagtttgt
tctggtgatgatagcagcatccctaagcagcagttcaattttcggcagatcagcgaaatt
gcaaacatggataaagataccacggtagacttgcttggtgttgttacttcagttaggcct
tcttttacagtaatgcttaagaatggcggggaaacccagaaaagagtccttcaactgaag
gacatgtctggttgcagtgtggaaatgaccttttggggtaacttctgtgatgctgaaggt
cagcagctgcagtcgctgtgcgattctggtttgaatcctatacttgcgctgaaatctggc
cgagttggtgaattcaatggcaaaacagtgagtacaactagctcaagtttgttaaaaata
aatccagatttccctgaagctgaaaggctgaggcagtggtacataactgaaggaaaaatt
gctgcctgcacttctttatctggggaaatgtcaagcatgggcaggactgatgtccggaaa
aaaactgcacagatcaaggatgaacgcctggggcaatcagaaaagcctgattggatcacc
gttcaaggtgcaatttcacaaatctacactgataatttttgttacccagcatgcaccagg
gaggttaatggtaaaagctgcaacaaaaaggtcacaaataatggtgatgggatgtggctt
tgtgagaaatgcgatcagagctctgaaacgtgcgagtatagatacctgctgtcgtgccat
atccaggatcatactgggttcactcatgcaacttcgttccaagaggctggccaggagata
atcggcctctcagcacaagatcttttcaggataaagcatgaagagcaagacgatgtacgg
tttgcagaaatcatacagcaggtccgttttcagcaatacctattcaagctgagagtcaag
gaagaagtctataatgatgagccgcgtgtgaagtgcaacattgttaaggctgaaagatac
gacccagtgaaagagagtcgtttttttctgggggccattgatagccttttggcggaggac
acttcaggctcttcccctgggctgaatggtggtcctgctgttaatgctggcttcgccaac
tcagaagctggacagagtgtgccagcctccaacaattcctatgccgtgaatatgggtggc
ccaaatcagtttgggcagcaattcagcgcatcgatcgggatgccggctgcaccatcagcg
acaccagcagcaggtagcggcttcgcacctaattcctatggtccttcagctgccaatgcc
agctcaggcttgtgcttcaaatgtaaccagcccgggcacttttcaagagactgtccaggg
caggctgccccctacagttcttcggctggcggcaacgccaacactggtctgtgcttcaaa
tgtaatcagcctgggcacttcgcaagagactgtccagcgcaggctgctggccaccagcgc
cagacgtatgcgaatggcgccgcggcaggaggatacaacaggcaatcctatgttggtagc
taa
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