Triticum aestivum (bread wheat): 123180880
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Entry
123180880 CDS
T07757
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123180880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123180880
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
123180880
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
ELL
DUF3069
Motif
Other DBs
NCBI-GeneID:
123180880
NCBI-ProteinID:
XP_044448986
LinkDB
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Position
1D:179775183..179786597
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AA seq
605 aa
AA seq
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MPETDDAPVRVRVSPRVIRKMKWKWRKYYVEPNPFPFHFANHPRRDPDPDRSIIRLRHLN
PPSVPRRPPLIPAAMGSVDLVLKPACEGCGSTSDLYGTGCKHTTLCSSCGKSMALSRARC
LVCSAPITNLIREYNVRANASTDKAFSIGRFVTGLPPFSKKKNAENKWSLHKEGLQGRQL
TDKMLEKYNRKPWILEDETGQYQFQGHMEGSQSATATYYLLMLHGKEFHAFPAGSWYNFS
KVAQYKQLTLEEAEEKMNKRKTSATGYERWMMKAATNGPAAFGSDMMKLEPANDGEKESA
RHKKGKDNEEGNNSDKGEENEEEEAARKDRLGLSKRGMDDDEEGGKDLDFDLDDDIEKGD
DWEHEETFTDDDEAVDIDPEERADLAPEIPAPPEIKQDDEENEEEGGLSKSGKELKKLLG
RSSGQNESDADDDDEEDDQDDESSPVLAPKQTDQPKDEPVDNSPAKPTPSSGHARSTPPA
SKSKQKRKSGGDDAKASSGAASKKAKVESDTKTSSIKEETPSSSKPTPKASASSRSANVS
PVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKIQKTNGHNYVVL
REDKK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgccggagacggatgatgctccggtccgggtccgggtctcgccgagggtgattcgcaaa
atgaaatggaaatggaggaagtactatgttgagccgaacccatttccatttcattttgcg
aatcaccctcggcgagacccggacccggaccggagcatcatccgtctccggcatcttaac
ccgccgtccgtgccccgtcgcccaccgctcatccccgccgcgatggggagcgtagacctg
gtgctgaagccggcgtgcgagggctgcggctccacgtcggacctctacggcactgggtgc
aagcacaccacgctctgtagctcctgcggcaagtccatggcgctttcccgcgcccgatgc
ctcgtctgctctgcgcccatcacgaacctcatccgggaatacaatgtgcgggcaaatgcc
agcacagataaggcattctctattggaagatttgtaactggtttgccgccattctcaaag
aaaaagaatgctgagaacaaatggtctcttcataaagaaggcctgcaaggacggcagctt
actgacaaaatgctggagaaatacaacaggaagccatggattttggaagatgaaactggt
caatatcagtttcaaggtcatatggagggatcacagtcagcaacagctacatactatttg
ttaatgttgcatggcaaggaatttcacgcatttcctgctggttcctggtataacttcagt
aaagttgcgcagtacaagcagctgactctggaagaggccgaggagaagatgaataagaga
aagactagtgcaactggttatgaacgttggatgatgaaagcagctacaaatgggccagct
gcctttggttcagatatgatgaaacttgagcctgctaacgatggggaaaaagaaagtgct
cgtcataagaaggggaaagataatgaggagggtaataattctgataaaggtgaggagaat
gaagaagaggaagccgctcgtaaagataggctcgggctctctaaaaggggcatggatgac
gatgaggaaggtggaaaagatctagattttgatttggatgatgacattgagaaaggtgat
gactgggaacatgaagaaacattcaccgatgatgacgaggctgtggatattgacccagag
gagcgggcagatttagctcctgaaattcctgctccacctgaaattaagcaggatgatgaa
gagaatgaggaagaaggtggcctgagcaagtcaggaaaggaattaaagaagctgcttggt
cgttcttctggacaaaatgagtcggatgccgatgatgatgatgaagaagatgatcaggat
gatgagtcatctccagtgcttgctccaaagcagacggatcaaccaaaagatgaacctgtt
gataacagcccagccaaacctacaccttcatcaggacatgctcgtagtacacctcctgca
tcgaaatccaagcaaaagaggaaatcaggtggtgatgatgccaaagcatctagcggtgca
gcttcaaagaaagcaaaggtggaatctgatacaaaaacatcaagtatcaaagaggagaca
ccatcttcctcaaaacctacaccaaaggcctctgcttcatcaagaagtgccaatgtatct
cctgtgacagaggatgagatcaggactgttcttcttgcagtggctcctgtcactacacaa
gatttagtctccagatttaagtctagactacgaggtccagaggacaagaacgcctttgct
gaaattctgaagaaaatttcgaaaatacagaagactaatggccacaactatgttgtcctt
agagaggataagaaatga
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