Triticum aestivum (bread wheat): 123181200
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Entry
123181200 CDS
T07757
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 12
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123181200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123181200
03036 Chromosome and associated proteins [BR:
taes03036
]
123181200
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123181200
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123181200
mRNA degradation factors
5'-3' decay
Decapping complex
123181200
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Gene silencing
piRNA pathway
123181200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DAP_epimerase
EPL1
Motif
Other DBs
NCBI-GeneID:
123181200
NCBI-ProteinID:
XP_044449389
LinkDB
All DBs
Position
1D:238166872..238172836
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AA seq
526 aa
AA seq
DB search
MHHPRARYPPGYDYGGGRGGNGGGGGGGGGGGGGGGNQNYYGGRNPHPQHHDYQQQQQQH
AQRSSFPQQQQQQHAQRNSFSQQQQQQHQQQQHQQWLRRDQAAAQESGEGAARTVARLDA
VDTSSQDWKAQLNIPAPDTRFRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQE
ESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDPEKNAIQVVILVPTRELALQTSQVC
KELGKYLNIEVMVSTGGTSLKDDIMRLYQPVHLLAGTPGRILDLTKKGICMLNECSMLIM
DEADKLLAPEFQPSVEQLIRYLPASRQLLLFSATFPVTVKDFKQKYLPRPYVINLMDELT
LKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIH
AKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRS
GRFGHLGLAVNLITYEDRFNMYRIEQELGTEIKTIPPQIDLAEYCQ
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcaccacccgagggcccggtacccgcccggctacgactacggcggcggccgcggcggt
aacggcggcggcggaggcggtggaggaggtggaggaggtggcggcgggaaccaaaactac
tacggcggccgaaacccgcatccccagcaccacgattaccagcagcagcagcagcagcac
gcgcagaggagctcgttcccgcagcagcagcagcagcagcacgcgcagaggaactcgttc
tcgcagcaacagcagcagcagcatcagcaacaacagcaccagcagtggctgcggcgggac
caggccgcggcccaggagtcaggagagggtgcggccaggacggtggcgcgactcgacgcg
gtggacacgagctctcaagattggaaggcacagttgaatattccagctccagatactcgt
tttaggacagaggatgttactgcaacgaaaggcaacgagtttgaagattattttttgaaa
cgtgagctacttatgggaatatatgagaagggatttgaaaggccatctcctattcaagaa
gaaagcattccaattgctctaactggaagtgatattcttgcaagagcgaaaaacggcact
gggaagaccgctgcattttgcattccagcacttgaaaagattgacccggagaaaaatgcc
atacaagttgttatattggtaccaacaagggaactagctctgcagacttcacaagtttgc
aaagagcttgggaaatacttgaatattgaagttatggttagtactggaggaaccagcttg
aaggatgacattatgcgtttgtaccaacctgttcatttactcgccgggacacctggccgt
atactggatcttaccaagaagggcatttgtatgctgaacgaatgttcgatgctcatcatg
gacgaggcggacaagctgttagctcctgagtttcagccttctgtggagcaactcattcga
taccttccagctagtcggcaactattgctgttttctgcaacctttcctgtaactgtcaag
gattttaagcagaaatacctacctagaccttatgttattaatctgatggatgaactaaca
ctgaaaggaatcacacaatactatgcctttgtagaagaaaggcaaaaggttcattgtctg
aacacacttttttcaaagcttcaaataaatcagtctattatattttgcaactctgttaat
agagttgagctactggcaaagaaaatcactgagctcggctattcgtgcttctacattcat
gctaaaatgttgcaagaccaccgaaacagggtgtttcatgatttccgcaatggcgcttgc
agaaaccttgtttgcacagatctttttaccagaggaattgacattcaagctgttaatgtt
gtcattaattttgacttccccaagactgctgaaacatatttgcatagggttggtcgttct
ggaagatttggacaccttggtttggcggtgaacttaatcacttatgaggaccgtttcaac
atgtataggattgagcaagaacttgggacagaaataaaaacaatacctccacagattgac
ctggcggagtattgccaatga
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