KEGG   Triticum aestivum (bread wheat): 123181261
Entry
123181261         CDS       T07757                                 
Name
(RefSeq) DNA ligase 1-like
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
taes  Triticum aestivum (bread wheat)
Pathway
taes03030  DNA replication
taes03410  Base excision repair
taes03420  Nucleotide excision repair
taes03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:taes00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123181261
   03410 Base excision repair
    123181261
   03420 Nucleotide excision repair
    123181261
   03430 Mismatch repair
    123181261
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:taes03032]
    123181261
   03400 DNA repair and recombination proteins [BR:taes03400]
    123181261
Enzymes [BR:taes01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     123181261
    6.5.1.6  DNA ligase (ATP or NAD+)
     123181261
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     123181261
DNA replication proteins [BR:taes03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    123181261
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     123181261
DNA repair and recombination proteins [BR:taes03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     123181261
   NER (nucleotide excision repair)
    Other NER factors
     123181261
   MMR (mismatch excision repair)
    Other MMR factors
     123181261
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase TrmB Presenilin
Other DBs
NCBI-GeneID: 123181261
NCBI-ProteinID: XP_044449461
LinkDB
Position
1D:complement(249253228..249260599)
AA seq 893 aa
MFLPRATTSLHSLLRCQFRPLPSPKTLAITLAPPPLLLCPRLCSSSSSSSRRAPTAAVKS
GEKRPPARLRRAEAVPPLAAGGAAMSSSGGAGGKRSVADVLMGNARDAARKAKKGAPAAS
GVPSPKKPRTKTAAEADGATAERAVDEKPPSPAKSPVKSKRPSSPPKSKSKADDAPEAKK
RSPSPTRSKTLAAAAKLEAAEKPLSPKRAKTLAAKSDAKPSDQALVSQSKDQASQSEDKK
TKISNATKSEEVNTTLELKKKGSEFDPMAAAYWKPGEPVPFLFLARALDLISNESGRIVI
TEILSNVFRTIIATTPEDLLATVYLSANRIAPPHEGIELGIGDASIIRALSEAYGRKEEH
VKKNLKELGDLGLVAKASRSSQKMMYKPKPLTISRVLDTFRTIAKESGKDSQDKKRSHIK
GLLVAATDCEPQYIIRLLQSKMRIGLAEKTVQMALGQAAVYSEKGSPPKKVQSPFEEAAK
IIKEAYSVLPIYDKIVPTLLDAGVWKLPETCNFSIGVPVGPMLAKATKSVSEIIDKFQGR
EYTCEYKYDGERAQIHCMEDGTVEIYSRNAERNTGKYPDVVDAISRIRKPTVKSFVLDCE
IVAYDREKKRILPFQILSTRARKGVTINDIKVSVCTFGFDILYINGKPLLQEQLKVRREH
LYNSFEEVPGVFQLATAITSNDLEEIQKFLDLSVNSSCEGLIIKTLDTDATYEPAKRSNN
WLKLKKDYMDSVGDSLDLVPIAAFHGRGKRTGVYGSFLLACYDEHNEEYQTICNIGTGFS
EQQLEERSTSLRSKVIKNPKAYYRFADTTDPDVWFEPSEVWEVKAADLSISPVHRAANGI
VDPNKGISLRFPRLLRVRDDKNPEHATTAEQVADMYRAQKINHSHNQEDEDDD
NT seq 2682 nt   +upstreamnt  +downstreamnt
atgttcctccctcgagccaccacctcgctccactccctgctgcgatgccagttccgcccg
ctcccctcgcctaaaaccctagccattaccctcgccccgccgcccctgctcctctgcccc
cgcctctgctcctcttcctcctcctcctcccgccgcgcccccactgccgccgtcaaatcc
ggcgagaagaggccgcccgcgaggttgaggagggcggaggcggtgccgccgctagccgcg
ggaggagcggccatgtcgtcctcgggaggcgccggggggaagcgctccgtggcggatgtg
ctcatggggaacgcgcgggacgccgccaggaaggccaagaagggggccccggccgcctcc
ggggtcccgtctccgaagaagcccaggacgaagacggccgccgaggccgacggcgcgacg
gccgagcgggcggtggacgagaaaccgccttcgccggccaagtcgcccgtcaagtcaaag
cgcccgtcgtcgccacccaagtccaagtcgaaggccgacgacgctcctgaggccaagaag
aggtccccgtcgcccacgaggtccaaaacgctagccgcggccgcgaaattggaggccgcg
gagaagcccctgtcgccgaagagggccaaaaccctagcggccaaatctgacgccaagccc
tctgaccaagcccttgtctctcaatctaaagaccaagcgtctcaatccgaggataagaag
accaaaatctcaaatgccaccaagtcagaggaggtgaataccactctcgagctcaagaag
aaaggcagtgagtttgatcccatggctgctgcctactggaagcctggcgagcctgtgcca
ttcctcttcttggctcgggcactcgacctcatctccaacgagtctggccggattgtcatt
acagagatcctgtcaaacgtgttccgtacgattattgccacaacaccagaggatctcctt
gccacagtatacctctcggctaaccggattgcgccacctcacgaagggattgagcttggt
attggggatgcatcaatcatccgtgcactttccgaggcatatggccgcaaagaggagcat
gtcaaaaagaacctcaaggaattgggtgatttggggcttgtggcaaaagcaagcaggtcg
tcacagaagatgatgtacaagccaaaaccactgacaatatcacgtgtgcttgataccttt
cgtacaatcgcaaaggaatctggcaaagacagtcaagataagaaaagaagccatatcaaa
ggacttcttgttgctgcaacagactgtgaaccccaatacattatacgacttcttcagtcg
aagatgcgtattgggttggcagagaaaactgtccaaatggctcttgggcaagctgctgta
tattctgaaaaagggtccccgccaaaaaaagtccaatcaccttttgaagaggccgcaaaa
ataattaaagaagcatattcagttcttccaatctatgataaaattgtcccgactcttctt
gatgctggtgtttggaaacttccagaaacatgcaatttctccataggtgtccctgttggt
cctatgttggcaaaagcaacgaaatctgtctcagagattatcgacaagtttcaaggtcgt
gagtacacttgtgagtacaagtatgacggtgaacgggcccagattcattgcatggaggat
ggaacagtagaaatttatagtcggaacgctgaaaggaatactgggaagtaccctgatgtt
gttgatgcaatttctagaatccgaaagcctacagttaagtcatttgtcttagattgcgaa
attgttgcttatgaccgcgaaaagaaaagaattttaccctttcagatactcagcacaagg
gcccgcaagggtgttactataaatgacatcaaagtatcagtctgtacttttggctttgat
atcctttacatcaatgggaaacctcttctccaggaacaacttaaagttcgccgagagcat
ctttacaactctttcgaggaagtgccaggtgtttttcaactggcaactgcaattacatca
aatgacctcgaggagatacaaaaatttcttgacttatctgtcaactccagttgtgaaggg
ttgattatcaagacattggatacggatgctacatatgagccggcgaagcggtcaaacaat
tggttgaaattgaagaaagattacatggacagtgttggagactctttagacttagtgcca
attgctgcttttcatggaagaggaaaacgaacaggtgtatatgggtcgttcctcttggca
tgctatgatgagcataatgaagaataccaaacaatctgcaatataggtactggattttct
gagcaacaacttgaagaacgttctacgagccttcgaagtaaagtaataaagaacccaaag
gcatattataggttcgctgacacaactgacccagatgtgtggtttgagccgtcagaggtg
tgggaggtcaaagctgctgatttgagcataagtccagttcatcgtgctgctaatgggata
gttgatccaaataagggtatctctctaagatttcctcgtttgttgcgggtgcgtgatgat
aaaaacccagaacatgcaaccacagctgagcaagttgctgacatgtatcgtgctcaaaaa
ataaaccactcgcacaaccaagaagatgaggatgatgactga

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