Triticum aestivum (bread wheat): 123182461
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Entry
123182461 CDS
T07757
Name
(RefSeq) transcription elongation factor SPT6 homolog isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123182461
03036 Chromosome and associated proteins [BR:
taes03036
]
123182461
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
123182461
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
123182461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
HTH_44
HHH_9
SH2
Tex_central_region
Tex_N
HHH_3
Motif
Other DBs
NCBI-GeneID:
123182461
NCBI-ProteinID:
XP_044450962
LinkDB
All DBs
Position
1D:409740711..409750002
Genome browser
AA seq
1632 aa
AA seq
DB search
MGRTVVSDDEEDDFIEAEEEDEPRPSRRARDDVDEQDDDEDEEEDDEDEGQNEYEKDGFI
VDDADEDEEEEEEEARASDDERRKKKKKRKKKRETEDFELDEDDYMLLQDNNITGITRPK
PPENKFKRLKKAGRESEMDGRSGFSDHDGAGKSRTAEETVRSSLFGNEEPFEEDFVEEDQ
QVDEDEVGEDDMDDEMGDFIVDEEEIDVNGQVVKRKKVKRKPLRQAAGVSSSALQEAHDI
FGDVDELLALRKQELERDAINSGELRGNRLEDEFEPFILAEKYMTPKDEQIKETDIPERI
QLSEELTGHPIDGDANSEEESVWIHNQLTGDGFLSLFGKEQVNREIHQSDIVNVLNMLHT
HKFEVPFIAMYRKESCLSLVKDNDANEQANEEETRKMKWHKLLWAVQTLDRKWLLLQKRK
VALQIYYERRYDDEKRRIDDVTRQALNRQLYHSIIDALKEAKSEKEVEDVDAKFNLHFPP
GEVEEVGQFKRPKRKSLYSICHKAGLWEVANQFGRSAEQLGQHLTLTRIPEAGELDSGKD
SPEDVAANFTCAMFETSQDVLRGARHMAAVEIGCEPIVKKHIRGIFMDKAVVSTKPTPEG
SSVIDTYHQLSGVEWLQEKPLSKFGDAQWLLIQKAEEEKLLKVTITLPEDAKKALMSEAR
ENYLSDCVSKSAQLWDEQRKMILDDAFLNFLFPAMEKEARSLLTAKAKCFLSMEYGKQFW
DKVSVAPWKKKDADKKDADIDLDDESELRVMACCWGPGKPATTFVMLDSSGELVDVLYAG
SISLRSQGVAEQQRKRNDQQRVLKFMTDHSPHVVCVGASNLNCRQLKDDIYEVIFKMVED
HPRDVNPQMENFSIVYGDESVPRLYENSRISSDQLPAQSAIVKRAVALGRYLQNPLAMVA
TLCGPGKEILSWKLHPLEQFLTPDEKYEVVEQVMVDATNQIGFDVNLAASHEWHFSTLQF
VAGLGPRKASALQKELVREGSIFSRKELVKPLGRKVFMNASGFLRVRRSGAAAASAQIID
LLEDTRIHPESYALAKNLAKDVCAADGLEANEMDDDEQEMAIEHVREKQDQLDRLDIDEY
SRSIGDDKRETLLDIKLELKCGFKDRRTPYAEPSPDEEFWLLSGETEDNISDGRIVQVTV
RHIQDNRIICTFDSGLKAIVMGDNYSDDGFDLESLQLHEGDVLTGKIKNVNKNRFIVYLT
CKQSEMSRWPFSRSNHDPYYRAQKVVLTQDDKARKQKEAKKHFKPRMIVHPHFQNLTAEE
AMQFLGDKEPGEKVIRPSSRGPSFLTLTLKIFDGVFAHKEITESGKDHKDITSLLRLGKT
LTIGDETFEDLDEVIDRYVDPLVGHLKSMLSYRKFRKGLKGEVDDMLRAEKSENPMRIVY
CFGISHEHPGTFILSYIRSTNPHHEYVGLYPKGFRFRKKDFDSIDRLVSYFQKHIDKPPP
DAGPSMRNVAAMVPMKNSAWGSGGANDGRRGDGDNDRDRHFSGRSAGGRFDSRNSSGGRG
RGRGRGRGNFGSDGDGGGGGGWTDNIGSGGGAWGTGGGSGGGDAGWGGGGDSNRGGGGDN
GWGAPASAAATDGGAGGWGTPAAAAATDGGAGGWGAATTPGAAGDDSGWGSAKKAVPAQD
SGGGWGSGGGGW
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcacggtggtttccgacgacgaagaggacgacttcatcgaggccgaggaagag
gacgagccgcggccgtcgcggagggccagggatgatgtcgacgagcaggacgacgatgag
gacgaggaggaggacgatgaagatgagggacagaatgagtacgagaaggatggcttcata
gtggatgatgcggatgaagacgaggaagaggaggaggaggaggcgagagctagtgatgat
gaaagacgcaagaagaaaaagaaaagaaagaagaagagagagacggaggatttcgagctt
gatgaggatgactacatgttgctccaggataataacattactggcatcactcgtccgaag
cctcctgaaaataagtttaagcggttgaagaaggcaggacgggaatctgaaatggatggg
cgctctggcttctccgatcatgacggagcaggaaaaagccggactgctgaggagacagtt
cgtagctccttgtttggtaatgaagaaccgtttgaggaggattttgtcgaggaggatcag
caggtagatgaagatgaggttggtgaagatgatatggatgatgaaatgggcgatttcatt
gtggacgaagaggaaatcgatgtgaatggccaagttgtgaaaaggaagaaggttaaaaga
aagcctctgcgacaagctgcaggtgtatcatcatctgcgctacaagaggcccatgatata
tttggggatgttgatgagctattagcactaagaaaacaagagcttgagagggatgctatt
aattccggcgagttgagaggaaacaggcttgaagatgagtttgaaccatttattctcgca
gaaaagtatatgacaccaaaggatgagcagataaaagaaactgatatacctgagaggatc
cagctgtctgaagagttaactggccatcctatagatggtgatgcaaatagtgaggaggaa
agtgtatggatacacaaccaactaaccggggatggatttctgtccctttttggcaaagag
caagtgaacagggagattcatcagagcgacatcgtgaatgtcttgaacatgctacatacc
cacaaatttgaagttccattcattgcaatgtataggaaggaaagttgcctgagtctggta
aaagataacgatgccaatgaacaagcaaatgaagaagagacgcgtaaaatgaagtggcat
aagctgctttgggctgttcagaccttagacagaaagtggcttcttcttcagaagcgcaag
gttgctttgcagatttattatgagagaagatatgatgacgagaaacgaagaatagacgat
gttacaaggcaggcacttaatcgacaactctaccactctatcattgatgcactgaaggaa
gcaaaatcagagaaagaagtggaggatgttgacgcgaaattcaatttacatttccctcct
ggtgaagttgaagaagtaggtcaatttaagcgaccaaaaaggaaatccttgtacagtatt
tgtcacaaggcaggattgtgggaggttgctaaccaatttggtcggagtgctgagcaatta
ggccaacatctaactttaacgaggatacctgaagcgggtgagcttgacagtgggaaagat
tctcctgaagatgttgctgcaaatttcacatgcgcaatgtttgaaacgtcacaagatgtc
cttcggggtgccagacacatggcagcagttgagatcggttgtgagcctattgtaaaaaag
catatcaggggtatcttcatggataaagcagttgtatcaacaaagcccacacctgagggc
agttcggtcatagatacttaccaccaattatcaggtgtggagtggctgcaagagaaacca
ctaagcaagtttggagatgcacagtggcttcttattcagaaagcagaggaagaaaagctt
ctcaaggttaccataacattgccagaggatgcaaagaaagcgctcatgtctgaggctcgt
gagaattacttaagtgactgtgtcagcaagtctgcacaactgtgggatgagcaacggaag
atgatactggatgatgccttcttgaattttctatttccagcaatggaaaaggaagctcga
tcactgttgacagcaaaagccaaatgttttctgtctatggaatatgggaaacagttctgg
gacaaggtttctgttgctccttggaagaagaaggatgcggacaagaaggatgcggacatt
gatctggatgatgagtcagagttaagagtaatggcctgctgctggggtcctgggaagcca
gcaaccacatttgtaatgctagactcatcaggagaattggttgatgttctgtatgctggt
tctattagtcttagatctcaaggtgttgctgagcagcagcgtaagagaaatgaccagcag
agggttctgaagttcatgactgaccattcgccacatgttgtgtgtgtaggagcttcgaat
ttgaactgcagacaactcaaggatgatatttatgaggttattttcaaaatggtggaagat
cacccaagagatgtgaacccacaaatggaaaatttcagcattgtctatggtgatgaatct
gtgcctcgcttgtacgagaactctcgaatatcttcagatcagctgcctgcccagtcagct
atcgtgaagcgtgctgtggcccttggtcggtacttgcaaaatcctttggcgatggttgca
acactttgtggacccgggaaagagatactgtcatggaaactacacccccttgaacagttc
cttactcccgatgagaagtatgaagttgttgagcaagtaatggtcgatgcgacaaatcag
atcggttttgatgttaatcttgctgctagccatgagtggcatttttccactttgcagttt
gttgctggtctgggaccgcgcaaagcttcagctttgcagaaggagttggtaagagaggga
tccatttttagccgcaaggagctggtgaaacccttaggcaggaaagtattcatgaatgcg
tctgggtttttacgcgtccgacgaagtggtgctgctgcagctagtgcccagatcattgat
cttcttgaggatacaaggatccatcctgaatcatatgcgttggcgaagaatttggccaag
gatgtctgtgccgcggatggacttgaagcgaatgagatggatgatgatgagcaagagatg
gcaattgagcatgtgagagagaagcaggatcaacttgaccgtcttgacatagatgaatac
agcagaagcatcggagatgataagagagaaacgttgttagacataaagttggagctaaag
tgtggtttcaaagatcggaggaccccttatgccgagccaagtccagatgaggagttctgg
ttgctttctggtgaaactgaggacaacatatcagatggaaggattgttcaagtaactgtt
cggcatatacaagataaccgaataatttgcacctttgattctgggttgaaagccatagtt
atgggagacaactattctgatgatggctttgatctagaatcactgcagttacatgaaggc
gatgtattaactggcaaaattaagaatgtgaataaaaataggttcatagtttacctaaca
tgcaagcagagtgaaatgagtagatggccattctcgagaagtaaccatgatccatactat
cgtgcacaaaaggtggttctgacccaggatgacaaggctcggaaacaaaaggaagcgaag
aaacatttcaagcccaggatgattgttcatcctcactttcagaatttgacggcggaagag
gcaatgcagttcctgggggacaaagagcctggcgagaaagtcattcggcctagctctagg
ggcccatcatttctaacactgaccctgaagatctttgatggtgtctttgcacacaaggag
ataaccgaaagtggaaaagatcataaagatattacaagtttgcttcgcctcggaaaaaca
ctgaccattggtgatgaaacttttgaagatcttgatgaggtaatagacagatatgtggat
ccattggtaggccacctgaaaagcatgctctcttatcgcaaattcaggaaagggttaaaa
ggcgaagttgatgatatgttgagggccgagaaatcagagaatcctatgagaatagtctat
tgttttggcatatctcatgaacatccaggcaccttcatattatcttacatcaggagtaca
aacccacatcatgagtatgttgggttatacccaaagggcttcagattccggaagaaagat
tttgacagcattgatcgtcttgtgtcatattttcaaaaacatattgacaaaccaccacct
gatgctggcccatcaatgcgaaatgttgcggcaatggtacctatgaaaaattcagcttgg
ggttctggtggcgcgaatgacggaaggaggggagatggtgataatgatagggacagacac
ttttctggaagatcagcaggaggcaggtttgattcaaggaacagttctggcggccgtgga
cgtggacggggtcggggtcgaggtaactttggcagtgatggtgatggtggcggtggtgga
ggatggactgataacataggcagtgggggaggtgcgtggggcactggtggaggatctgga
ggcggggatgctggatggggtggtgggggcgacagcaaccgtggtggcggtggggataat
ggctggggcgcacctgcttctgccgctgccactgacggtggcgcaggaggctggggtaca
cctgctgccgctgctgccactgacggtggcgccggaggctggggagcagctactactcct
ggtgctgctggtgacgactcaggatggggcagcgccaagaaggccgtcccagcacaggat
tctggaggtgggtgggggtctggcggtgggggctggtga
DBGET
integrated database retrieval system
