Triticum aestivum (bread wheat): 123182757
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Entry
123182757 CDS
T07757
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123182757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123182757
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
123182757
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Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
123182757
NCBI-ProteinID:
XP_044451351
UniProt:
A0A1D5SZH7
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Position
1D:442529474..442534261
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AA seq
203 aa
AA seq
DB search
MVGAPSSPVVNVYPLANYTFGTKEAKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQ
EHNHPHILLLQIGNTFCKLPGGRLKPGESEIEGLKRKLCSKLAVNSPSFPPNWQVGECVA
EWWRPNFETVMYPYCPPHITKPKECKKLFIVHLTEREYFAVPRNLKLLAVPLFELYDNVQ
RYGPVISTIPQQLSRFQFNMVSS
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcgctccgtcctcgccggtggtgaacgtgtacccgctcgccaactacacgttc
ggcaccaaggaggccaagatggagaaggacacctccgtcgccgaccgccttgctcgcatg
aaagtcaactacatgaaagaaggaatgcgaacaagtgttgaagcaatcctattggtgcaa
gagcacaaccacccccacatactgttgttgcaaattggaaacacattttgcaaacttcct
ggtggacggttgaagcctggagaaagtgaaattgagggcctgaaaaggaagctgtgcagc
aagcttgcagttaactcaccttcctttccacctaactggcaggttggtgagtgtgttgct
gaatggtggaggccaaactttgaaaccgtgatgtatccttactgccctccacatataaca
aagcccaaggagtgcaagaagcttttcattgttcacctaactgaaagggagtatttcgct
gttccaaggaacttgaagctacttgctgttccactgtttgaactatatgacaatgttcag
cggtatgggccagtgatttccaccatcccgcagcagctgtccaggttccagttcaacatg
gtgagctcgtaa
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