Triticum aestivum (bread wheat): 123183240
Help
Entry
123183240 CDS
T07757
Name
(RefSeq) zinc finger CCCH domain-containing protein 27-like
KO
K13192
RNA-binding protein 26
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
taes01009
]
123183240
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123183240
03041 Spliceosome [BR:
taes03041
]
123183240
Protein phosphatases and associated proteins [BR:
taes01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123183240
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
123183240
Spliceosome [BR:
taes03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
123183240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
zf_CCCH_4
RNA_bind
RRM_PARP14_3
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
123183240
NCBI-ProteinID:
XP_044451944
LinkDB
All DBs
Position
1D:481657865..481665660
Genome browser
AA seq
925 aa
AA seq
DB search
MHKGSIAQALDADKIEVPSPKEESNSTDSEAATDTENFEISDDDDDDRNHKHRRREAMPQ
PFGESIEEQAAGRPFKRRPRISGNGQPFGGADSRGEAQNNFIPKFKRRPGPGAHSRGGRV
NQSFHSASAAARPPMTRGRGRNGAPWTHHDPRFNTLDMIDFASQMASQGPPTHPNLFMGP
PLPSGGGAQNGPWGPYGFMPGMPNGMMDPIHPLGMQGPIQPPLIDLGMPRQRCRDFEERG
FCLRGDMCPMEHGVNRIVVEDMQSLSQFNLPVSVPNAPGLGIQSEAGTAHVNLTNLGGSK
GVPAKDMKSGVADNPSKLNGSTVSAVADADVYDPDQPLWNNERPEASIAGFAHTNDGIWN
AETSSYEAGWEHANQGFAADDSQNPKSSVWGRIASKRKSGPGKTANTTSTSATGNQRSDY
NDDMGPSTVQVKPASTKDTNGRPSSRMSADVGRQSNSRTSHKASRTLYVNGIPPESNRWE
ALLSHFEKFGQVIDIYVPANSEKAFIQFSKREEAEAALKAPDAVMGNRFIRLWWANRDRI
TDEGDGRISAKPPLTNSALPQPSSSNRGKDLQSTTPRASSGSSASGPGIGPKKLPANSIT
SIPPAPKRQENLEMLEAIRKKQDMLAQQRDELLQRLEKYAKQTSSANSVKQAEAGGKTVG
SNAVGKVGDVSSMNTGTEGPQEVAGTLENKISGELASSSPKYAPTSTQKPAVAARQLSPL
LAPPQNRFKLDNRTTSFRILPPLPPEIANETVLKDHFAAFGELSSVVLEDTEAHNHDTTL
KPSLSCSACVTYATRQSAEKAFISGKSCKGHMLRFMWLTASPGSNNQSRPQKSLIPVRPS
GISGQTGNMTSESQSPVGKISSAAASGTAAIPHSESVPSAESSKTFPVGISKELPSVSSL
SSNVECPPGNDSTMNAVFTDPGLPQ
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaagggtctatagctcaagcattggatgctgacaaaatagaagttccttcacca
aaggaagaaagtaattccaccgattcggaagctgctacagatactgaaaactttgaaatt
agtgatgacgacgatgatgatcgtaatcacaagcaccgaagaagagaggctatgcctcaa
ccttttggtgagagtatcgaagagcaagctgcagggaggccttttaaaagaaggcccagg
atttctggtaatgggcagccttttggtggagctgattcacgtggggaagcacagaacaac
ttcataccaaaattcaagaggcgtcctggaccaggagctcacagtcggggaggtagagtg
aaccaatccttccattcagcttctgctgctgctcgccctcctatgacacggggaagagga
cggaatggtgcaccctggactcatcatgacccaagatttaacacacttgacatgattgat
tttgcatcacagatggcctcacaaggaccgcccacgcatcctaacttatttatgggtcct
ccactgccgagtggtggtggtgctcaaaacggtccgtggggtccgtatggatttatgcct
ggaatgcctaatggaatgatggatccaattcacccacttggaatgcagggccctattcag
cctcctttaattgatcttggcatgcctcgtcaacgttgtagagactttgaggagcgtgga
ttttgcttgagaggggatatgtgccccatggagcatggtgtaaatagaattgttgttgaa
gatatgcagagcctatcacagttcaatcttccagtctcagttccaaatgctccaggacta
ggaatccaaagtgaggcaggaactgctcatgttaacttaacaaacctagggggcagtaaa
ggtgttcctgcaaaagatatgaaatctggtgtggcagataatccatcgaagctaaatggg
agcactgtttcagctgttgctgatgctgatgtatatgatcctgatcagcccctgtggaac
aatgaacggcctgaagcatctattgctggttttgcacatactaatgatggaatatggaat
gctgaaacctcaagctatgaagcagggtgggagcatgcaaaccagggttttgcagctgat
gattcacaaaatccaaaatcttctgtttgggggagaatagcatcaaagagaaaatccggg
cctggtaaaacagctaatactacttcgacaagtgcaactggaaaccaaagaagtgactac
aatgatgatatgggtcctagcactgtccaagtaaagcctgcttctactaaggatactaat
ggtcgacccagttcaagaatgtctgcagatgtgggccggcaaagtaatagcaggacctct
cataaagcatctcgcacactttatgtaaatggcattccaccagaaagcaacagatgggag
gcccttctgtcgcacttcgaaaaattcggtcaagtaatagatatatatgttccagctaac
agtgagaaagcttttatccagttctctaaaagggaagaagctgaagctgctctaaaagct
ccagacgctgtgatgggaaaccgttttataaggctgtggtgggctaacagagacaggatt
actgacgagggagatggtagaatctctgcgaaacctccgctgacaaattctgcccttccc
caaccatcttcatccaacagaggcaaggatcttcaatctacaactccaagggccagttct
ggatcttctgcatcaggccctggtataggtcctaaaaagttgcctgcaaacagtataaca
tcaatacctcctgctcccaaaaggcaagaaaatctggaaatgctggaagcaattcgtaaa
aaacaagatatgttagctcagcagcgtgatgagttacttcagcggttagagaaatatgcg
aaacaaacaagttcagcaaattcagtaaaacaggcagaggctggtggaaaaacagttggg
tcaaatgctgtggggaaagtgggcgatgtcagttccatgaacactgggacagaagggccg
caagaggtcgctggtacactggaaaataaaatttctggggagttggcttcatcttcccca
aaatatgctccaacatccacacagaaaccagctgtagctgcgaggcagctatctcctctg
ttagcaccaccgcagaataggtttaagcttgacaaccggaccacatcgtttaggatcctt
cctcctttgccacctgaaatcgcaaatgaaactgtcttgaaagatcattttgcagcattc
ggtgagctttcatctgttgtactggaagacaccgaagcccacaaccatgatacaacctta
aagccttccctgagttgctcggcttgtgtgacgtacgcaacgaggcaatctgctgagaaa
gcatttattagtggcaaatcttgtaaagggcacatgctacggtttatgtggttgacggcc
tctcctggctctaataaccaatcgaggcctcagaaaagtttaattcccgtcaggcccagt
ggcatctcaggccaaactggcaacatgacatctgagtcccaaagccccgttgggaaaatt
tcatctgctgccgcatctggtacagcagccattcctcatagtgaatccgttccaagtgca
gaaagttcaaagacatttcctgttgggatttccaaagaattaccttccgtttcctctcta
tcatcaaatgttgagtgtcctcctggaaatgattccacaatgaatgccgtctttacagac
ccgggtcttccacagtga
DBGET
integrated database retrieval system
