Triticum aestivum (bread wheat): 123183325
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Entry
123183325 CDS
T07757
Name
(RefSeq) structural maintenance of chromosomes protein 3-like isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
taes03036
]
123183325
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
taes00535
]
123183325
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
123183325
Meiosis-specific proteins
Cohesin complex and associated proteins
123183325
Proteoglycans [BR:
taes00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
123183325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
MscS_porin
Motif
Other DBs
NCBI-GeneID:
123183325
NCBI-ProteinID:
XP_044452044
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Position
1D:complement(487783203..487795257)
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AA seq
1239 aa
AA seq
DB search
MYIKKVIIEGFKSYREETSTEPFSPKVNVVVGANGSGKSNFFHGNALKHEILLNYYSFLW
LLTLVCYSHPNFTMLNAVAIRFVLSDMFQNLRSEDRGALLHEGAGHSVVSAFVEIIFDNS
DNRIPVDKEEVRLRRTVASKKDEYYLDGKHVSKTEVMNLLESAGFSRSNPYYVVQQGKIA
SLTLMKDSERLDLLKEIGGTRVYEDRRRESLKIMQETANKRKQIDQVVRYLEERLRELDE
EKEELKKYQQLDKQRRSLEYTILDHELNDARNELASMDDNRRQISERMSQADNEVVELRE
RVKSLEKEIKASTKGINETKSEKGDAEKKRTEALKVVSQIELDLRDLKDRISSEKRAKDE
AVRELNSMRKESEKSKSELAQISKVHAAKLKEEEDISKSIMDREKRLSILYQKQGRATQF
KNEAARDEWLRKEIHDLERVLLSNRKQESLLQDESQKLKDEINKLTNHIESRRSESSKLE
AVLADKQKNHNDFTKQKNALQDERKSFWKEENSVTAEIDRLKEDLVKAQKSLDHATPGDI
RRGLNSVSRIIRDHGIGGVFGPVLELVDCEEKFFTAVEVTAGNSLFHVVVENDDISTRII
QVLTREKGGRVTFIPLNRVHAPNVNVPQSSDFVPLLKKLKFRAEHRRAFEQVFGRTVICR
DLETATRVARSNSLDCITLDGDQVAKKGGMTGGFYDSRRSRLKFVKVIRDNKAEIEKKTA
HLENVGKKLKDIDKKITDLITKHQQMDAERDHAKSELEQFKADIASATKQKGSLEKALAK
KEKSLANIRNQIEQIQSGIAMKNDEMGTELIDQLTLEERDLLSRLNPEITRLKEKFLSCK
NSRIEIETRKEELENNLSTNLMRRQKELEAIISSADSKTLPVEVEAKEQELKESKRTLDE
ATTVLKANVDAINAHTRQMEQLKKQRDDLKALEANLEQTVQDGAKDLEQLMSSRSTYLVK
QDECMKKIRDLGSLPADAFETYKRKNKKQLQKLLYDCNEQLKQFSHVNQKALDQYVNFTE
QREQLQRRRAELDAGDEKIRELISVLDQRKDESIERTFKGVARHFREVFSELVQGGHGYL
VMMKKKDGDAGDDDMDEDAPREADPEGRIEKYIGVKVKVSFTGKGETQSMKQLSGGQKTV
VALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVGSVVRRLADLADTQFIATTFRPEIL
KVADKIYGVTHKNRVSFINVVSKEQAMDFIEHDQTANAS
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaagaaggttataatcgaagggtttaaaagctacagggaggagacctcgaca
gaacctttcagccccaaagttaacgtagtcgttggtgcaaatggatctggcaaatcaaat
tttttccatggtaatgccttaaaacatgagattctgctgaattactattcattcttatgg
ttattgacgcttgtgtgctactcccatcctaatttcaccatgctgaatgctgtagctata
cgctttgtcctgagtgacatgtttcagaacctgcgcagtgaggacaggggagctcttctc
catgaaggtgctggacactcagttgtatctgcttttgtcgagataatttttgataattca
gacaaccgtattccagttgataaagaagaggtacgcttgcgaaggacagttgcttcaaag
aaggatgaatactacttggatgggaaacatgtcagtaaaactgaagtcatgaatctgctg
gagagcgctggtttctctcgatctaatccatactatgttgtccagcaaggaaagattgca
tcccttactctaatgaaagattctgaacgactggatcttctcaaagagattggtggtacg
cgtgtttatgaagatagacgtcgggagagcttgaaaataatgcaagaaacagccaataaa
aggaagcagattgatcaagttgtccgctacctggaggagagactgagagaacttgatgaa
gagaaggaggaactaaagaagtaccagcagctggacaaacagagaagatcacttgaatat
actatattggaccatgaactaaatgatgctagaaatgaattagcttcgatggatgataat
cgaagacaaatttctgaaaggatgtctcaagcggacaatgaagtggtagagttacgtgag
agggtcaaaagtttggagaaagaaataaaagcctctactaaagggataaatgaaaccaag
tctgaaaagggcgatgcagagaagaagcgtactgaagcactaaaggtagtttctcagatc
gaacttgatctgagagatttaaaagacagaatttcaagtgaaaaacgagcaaaggatgaa
gccgtaagggagttaaatagtatgaggaaagaaagtgaaaagtcaaagtctgaattggct
caaattagtaaggtgcatgcggccaaattgaaggaagaggaagatatatcaaaaagtata
atggaccgcgagaagcggctgagtatattgtaccaaaagcaggggagggcaactcaattt
aagaatgaggctgccagagatgagtggcttcggaaagaaattcatgatcttgagcgtgta
cttttatcaaatagaaagcaggaaagcttacttcaagatgaaagtcagaagcttaaagat
gaaattaataagttgacaaaccacattgaatctcggagaagtgaatcaagcaagttagag
gctgttcttgcagacaagcaaaagaatcacaatgacttcacgaagcagaaaaatgcactt
caagatgaaaggaaatcattttggaaggaggaaaatagcgtgacagctgaaatcgatagg
ctaaaggaagatcttgtgaaggcacagaagagtttggaccatgcaacacctggggatatc
aggagaggcctgaattctgttagccgaatcatcagggaccatggtattggaggagttttt
ggtccagtgttagaactggttgactgcgaagagaagttttttacagctgttgaggtcact
gctgggaatagcttgttccatgtggtggttgaaaatgacgatatatcgacaaggataatt
caggtattgactcgagaaaaaggtggacgggtgactttcataccactgaatagagtgcac
gctccgaacgtcaatgttccacagagctctgattttgttccattgttaaagaagttaaag
tttcgtgctgagcatcgtcgcgcttttgaacaggtttttggtaggacagttatatgccga
gacctggaaactgcgaccagagttgcacgcagcaatagtctagattgcatcacacttgat
ggtgatcaagtagcgaaaaagggtggcatgacaggaggtttctatgattctagacgctca
agactgaagtttgtaaaagtaatcagggacaacaaagcagaaattgaaaaaaagacggca
catctagagaacgtgggaaaaaagttaaaagatatagataagaaaattacggatttgatt
accaaacatcagcaaatggacgctgaacgtgatcatgccaagtcggagttggaacagttt
aaagctgatattgccagtgcaacgaagcagaagggatcactggagaaagcccttgcaaag
aaggaaaaatcactcgcgaacatccgcaaccaaattgagcaaatccaatctggcattgca
atgaaaaatgatgagatgggcacagaactgattgaccagctaactttagaagaaagagat
ctcctttcgcgactgaatcctgaaattactagattgaaggagaagttcctctcgtgtaaa
aacagtcgcattgagattgaaacaagaaaggaagaactggagaacaatttgtcaactaat
cttatgaggcgtcagaaagagttggaagcaataatttcatctgcagattctaaaactttg
cctgttgaagtcgaagcaaaggagcaagaattgaaagagtctaagaggactcttgatgag
gcgacgacagtactgaaagctaatgttgatgctattaatgcccatacaagacagatggag
caactgaaaaaacaaagggatgatctgaaggctcttgaagctaatttggagcagacggtg
caagatggtgcgaaagacttggaacagttgatgagcagtaggagcacgtatcttgtcaag
caagatgagtgtatgaagaaaatccgagatctgggctcattgcctgccgatgctttcgaa
acgtacaagagaaaaaacaagaagcagctacagaagctgctctatgactgcaatgagcag
ttgaagcaatttagtcatgtcaaccaaaaggctcttgaccaatatgtgaacttcactgaa
cagcgtgaacaactgcagagaagacgggctgaacttgatgctggtgacgagaaaattaga
gagttgatatcagttttagaccaaaggaaggatgaatcaattgaacgcacatttaaagga
gttgcaaggcacttccgcgaagtgttctctgaattagtgcaaggtggccacggatacttg
gttatgatgaagaaaaaggatggtgatgctggcgatgatgacatggatgaggacgcgcct
cgtgaagcagatcctgaagggaggatagagaagtatattggtgtgaaagtcaaggtttcc
ttcactggcaagggagaaactcagtccatgaagcagttgtctggagggcagaagacagtg
gtggcattaacactgatcttcgctatccaacgatgtgacccagctccgttctacctgttt
gatgagattgatgctgctctggatcctcagtacagaacggctgtcgggagcgtggtccgg
cgtctggccgacctggcggacacccagttcatagccaccacattcaggccggagatcctg
aaggtcgcggacaagatctacggcgtgacacacaagaacagggtgagcttcatcaacgtg
gtgtccaaggagcaggccatggacttcattgagcacgaccagacggccaacgccagctga
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