Triticum aestivum (bread wheat): 123183344
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Entry
123183344 CDS
T07757
Name
(RefSeq) RNA polymerase sigma factor sigC-like
KO
K03093
RNA polymerase sigma-I factor
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123183344
Transcription machinery [BR:
taes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
123183344
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
123183344
NCBI-ProteinID:
XP_044452068
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Position
1D:488825009..488827878
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AA seq
578 aa
AA seq
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MGLPMVRGPCFCSPSPSSSSSSSSSSSPWMLQAHLPKHPHPRHGLSGRSVWSESLRVLAL
HLLLNRRADLCRRRGDIARTAASSSGLLQITENKATSSPKTKVDAERTSLVGSLDRNAGF
DMIYEDMSSWMDVAHTSSNSLEYNLLMQNIHVLQSSLAAQDLVVLERDILVHIEQLGALK
WFNASRSSATITPTSLESDFALPWNDTEFAPVTPLDEQSDDDQLVVIRSGKSQERKLKRI
RASENISGVCVKVSSRKPRKSRKSTSSQFISEWKNYPGRRRSIVREQSDLLVTIKECANL
EKIRENMVKEGQEVCYDKWAKAAGVDEAVLKSRLQAGYCCRERLLVTTEWLVKYIARTYT
GMGTAFEDLLQAGKMGVLDGAERFDSQRGCKFSTYVKYWIRKPMLALLAENSGVIQLPAR
MDCIIRKVREAKRAIRSSTGRNPIDAEIATFVGASVANVRLARKCSRRVVSLYMEVGAGQ
NAKFVDVTPDTSIDDPEEAIFRRQLRERLLMVLDRLPTREGRVLKLRHGLEDGRCRSLEQ
IGGIYHVSKEWIRKIEKSAMSKLRNEDVHDELKDFCGF
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgcccatggtgcgcggcccgtgcttctgctcgccatcgccttcgtcgtcgtcg
tcgtcgtcctcctcctcctcgccgtggatgctgcaggcccatctccccaagcacccccac
cctcgccatggattgagtgggaggtcagtttggtctgaatccctgagagttctggccctg
catctcttgctcaatcggcgcgctgatctttgccggcgccggggcgacatcgccagaact
gctgcatcttcatccgggttgcttcagattacagagaacaaggcaaccagctcgccaaaa
acaaaggtcgatgcagaaagaacatcacttgttggctctcttgacagaaatgcggggttt
gacatgatttatgaggacatgtcttcttggatggatgtggcacacacaagtagcaacagc
ttggagtataacttgttgatgcaaaacatccatgtgttacagagtagtttggctgctcaa
gatttggtggtgctggaaagagatatccttgtacatattgaacagcttggagctctgaaa
tggtttaacgcctcgaggtccagcgccaccataacaccgacctcacttgaatcagatttt
gcactcccttggaatgatactgaattcgccccggtgactcctctcgatgagcaaagcgac
gacgatcaactggtcgttattcggagcgggaaaagccaagagaggaaactgaagagaatt
agagcatcagaaaacatctccggggtttgtgtaaaagtatcctcacgaaaaccaagaaaa
tcacgcaagtccactagtagtcaatttatatctgagtggaaaaactatccaggccggcga
aggagcatagttcgggaacagtcggacttgctggtgactatcaaggaatgtgcaaacctt
gagaagatcagggaaaacatggtgaaggaagggcaggaggtctgctatgataagtgggca
aaagcagctggagttgatgaagcggtcctgaagagtagactgcaagcaggctactgctgc
agagagaggttactggtgaccaccgagtggcttgtcaagtacattgcaaggacatacacc
ggaatgggaacagctttcgaggatctactccaggctgggaaaatgggtgtccttgatggc
gctgagaggttcgacagccagagaggatgcaaattctcaacctatgtgaagtactggata
aggaaacccatgctagcgctcctcgctgaaaattctggagtgatccagctgcccgcaagg
atggactgtatcatccgaaaggtcagggaagctaagcgggcgattcgatccagcactggg
aggaatccaatagacgcggagatcgcgaccttcgttggcgcgtccgttgccaatgttaga
ttggcgcggaagtgctcccgtcgtgtcgtttcactctacatggaggtcggagctggacag
aacgccaagttcgtggatgtgaccccggacacatcaatagatgatccagaggaggccatc
ttccggaggcagctgagggagagactgctcatggttctggacaggctcccgacgagagaa
gggcgtgtgttgaagctgcggcatggcctcgaggatggcaggtgccggtccctggagcag
atcggaggcatctaccacgtgtccaaggagtggatcaggaagattgagaaatcggccatg
tcgaagctcaggaacgaggacgtgcatgatgagctgaaggacttctgtggattctag
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