Triticum aestivum (bread wheat): 123183424
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Entry
123183424 CDS
T07757
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 15
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
taes03015
mRNA surveillance pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123183424
09122 Translation
03013 Nucleocytoplasmic transport
123183424
03015 mRNA surveillance pathway
123183424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123183424
03041 Spliceosome [BR:
taes03041
]
123183424
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123183424
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123183424
Spliceosome [BR:
taes03041
]
Complex C
Other components
EJC/TREX
123183424
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123183424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Cas9_PI
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
123183424
NCBI-ProteinID:
XP_044452171
LinkDB
All DBs
Position
1D:496750379..496753436
Genome browser
AA seq
344 aa
AA seq
DB search
MDVICQAKSGMGKTAVFVLSSLQQIDPTAGQVAALVLCHTRELAYQICNEFERFSKFLPE
LKVAVFYGGVHIKKHQDLLKNDCPHIVVGTPGRILALARDKDLSLKNVRHFILDECDKML
ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPICKKFMQDPMEIYVDDEAKLTLHGL
VQHYIKLTESEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPSICIHSGMT
QEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG
TKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTYMPS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcatctgccaagcaaaatctgggatggggaagactgctgtctttgtcctgtcg
tctctccagcagatcgatcctactgctggtcaggtggcagcgctcgtattgtgccacacc
agagagctggcttaccagatttgcaacgagttcgagaggttcagcaaatttctgcccgaa
ttaaaggttgctgtattctatggaggtgttcacatcaagaaacaccaggatttgctcaag
aacgactgcccccacattgttgtgggcacacctgggaggattctagctctagctagagac
aaggacctttctttgaagaatgtgaggcatttcattcttgacgagtgtgacaagatgctt
gagtcactggacatgcggagggatgtccaggagattttcaagatgacacctcatgataag
caggtcatgatgttttcggcaactctcagcaaggagatccgtcccatttgcaagaaattt
atgcaagatcctatggaaatttatgttgatgatgaggcaaagttgacccttcatggtctt
gttcagcactatataaaattgacagagtcagagaagaatcgaaaattgaacgatctcttg
gatgctcttgatttcaaccaagttgtgatatttgtgaagagcgttagcagggctgcagag
ctgaacaagttgctgtgtgaatgcaacttcccttcaatctgcatccattctggcatgacc
caggaagagaggctgacccgatacaagaacttcaaggaagggcacaagaggattcttgtg
gcgacggatttggttggcagaggaatcgacattgagcgtgtcaacattgtgataaactat
gacatgcctgattcagctgatacctacttgcacagggttggaagggctgggcgttttggc
accaaggggctcgccataacttttgtttcgtcggcctcggactcggacgtccttaaccag
gtgcaagaacggtttgaggtggacatcaaggagctgcctgagcagattgacacttcaaca
tacatgccttcgtag
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