Triticum aestivum (bread wheat): 123184528
Help
Entry
123184528 CDS
T07757
Name
(RefSeq) 5'-3' exoribonuclease 3-like
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03008
Ribosome biogenesis in eukaryotes
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123184528
09123 Folding, sorting and degradation
03018 RNA degradation
123184528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123184528
03019 Messenger RNA biogenesis [BR:
taes03019
]
123184528
03009 Ribosome biogenesis [BR:
taes03009
]
123184528
03016 Transfer RNA biogenesis [BR:
taes03016
]
123184528
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123184528
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
123184528
Ribosome biogenesis [BR:
taes03009
]
Eukaryotic type
Pre-60S particles
RNases
123184528
Transfer RNA biogenesis [BR:
taes03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
123184528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
FancD2
Motif
Other DBs
NCBI-GeneID:
123184528
NCBI-ProteinID:
XP_044452561
LinkDB
All DBs
Position
2A:complement(37002008..37009196)
Genome browser
AA seq
1052 aa
AA seq
DB search
MGVPAFYRWLAEKYPMVVVDVVEEEAVEIDGVKVPIDTSKPNPNGLEFDNLYLDMNGIIH
PCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLLYMAIYGVAPRAKMNQQRSRRFR
AAKDAADAAEEEEKLRQEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSVALQYYIHL
RLNYDLGWKKIKVILSDANVPGEGEHKIMSYIRGNRNLCNELNANTRHCLYGLDADLIML
ALATHEVHFSILREVVFTPGQQDKCFLCGQVGHLAAKCEGKAKRKAGEFDEKGDEIVPKK
PYQFLNIWTLREYLEYEFRMPNPPFKIDLERIIDDFIFMCFFVGNDFLPHMPTLEIREGA
INLLIAVYKKEFPNMGGYLTDTCTPDLNRVEHFIQAVGSYEDKIFQKRARLHQRQAERIK
RDKAQAKRGDDLDPHVSGDLIVPVARFQGSRLASGAVASPYEHNGAHKDSTEKGSRAKKA
RVSSSDSSLSAALVEAEISVEEQARENKEELKSMLKVALRDKSDLFNSENPEEDKIKLGE
PGWRERYYEDKFGARTPEQIEEIRRDVVLKYTEGLCWVIHYYYEGVCSWQWFYPHHYAPF
ASDLKGLGRLNITFELGSPFKPFDQLLGVFPAASSHALPLRYRQLMTDPSSPIIDFYPID
FEVDMNGKRFSWQGIAKLPFIDEARLLSEIEKVEHTLTPEEARRNSTMYNMLFVNSLHPV
APYIYSLSSKFGHLPDNERNEIKEPLKPSASGGMSGYISLCGGDPCSPVFRSPVDGLEDI
MDNQVICSIYKLPDPHKHIARPPAGVIMPKKIVEAGDLKPPPVLWHEDNGRRPHDDNSSR
QNPAGSIQQGRQLGEAAHRLVANSLNVRGGGHYPPARPYQTIMSGMHYPNGMPPWMEQPA
GHPGWHVPSDNLPYGHVPAYALPSGSGHQYTRDNRGRHHPYARDSHADSRGAGRHPSRYH
QNNSSNAYSSYPAPPSSGFGRYGQPPSHAGGYQPAPYTATQQWQQQQQPRSSYSGGGALP
ARPNSRPQQSQNSYGSLDRTSSRRPPGQGFPL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcccggcgttctaccggtggctggcggagaagtacccgatggtggtggtggac
gtggtggaggaggaggccgtcgagatcgacggcgtgaaggtgcccatcgacacctccaag
cccaaccccaacggcctcgagttcgacaacctctacctcgacatgaacgggatcatacac
ccctgcttccaccccgaggacaggccctcgccgacgacatttgctgaggtcttccagtgc
atgttcgattacatagacaggctctttgtcatggttcgccctcgaaagcttctctacatg
gccatttatggtgtggctcctcgtgctaagatgaaccagcagcgctctagacgattcaga
gctgcaaaagatgctgctgatgcggccgaagaagaagaaaaactgcgtcaagagtttgag
agggaaggaagaaagcttcctccaaaacagcaatcacaaacctgtgattctaatgttatt
acccccgggacagagttcatggctgttctatcagttgctttgcagtactacatccacctc
aggttgaattatgatcttggatggaaaaaaattaaagttattctttctgatgccaatgtt
cctggtgaaggggaacacaaaatcatgtcctacattcgtggcaataggaacctctgtaat
gaactcaatgcaaatacccgacattgcctgtatggcctggatgcagatctaatcatgtta
gctctagcaacacatgaagtacacttctccatactgagagaggtggtgtttacacctgga
cagcaggacaaatgcttcctgtgtggtcaagttggacatctagcagcaaagtgtgaagga
aaggcaaaacggaaagctggggagtttgatgagaagggtgatgaaatagtaccaaagaaa
ccttaccagttcttgaatatatggaccctacgagagtacctagaatacgagttcagaatg
ccaaatccacctttcaagattgatcttgaacgcatcattgatgatttcatcttcatgtgc
ttttttgttggcaatgattttcttccacacatgccgacactagagattcgtgagggagct
attaatttgctaattgctgtatacaagaaggaatttcctaatatgggtggctatttaacc
gacacttgcacgccggatctgaatagagttgaacacttcattcaagcagttggttcatac
gaggataaaatatttcagaaaagagcacgtttgcaccagcgtcaagctgaaagaataaaa
cgtgataaagcccaagcaaagcgaggcgatgatctggatccccatgtcagtggcgatctt
attgtacctgttgcgcgtttccaagggtctcgccttgcctctggggctgtggcttcacca
tatgaacataatggagctcataaagatagcacggaaaagggcagtcgagctaagaaagca
cgtgtatcatcttcagattccagcctttctgctgctcttgttgaagctgaaattagtgtc
gaagaacaggcacgtgaaaacaaagaagaactgaagtcaatgcttaaagtcgcacttcgt
gataaatcagatctttttaattctgaaaatccagaggaggacaagataaagcttggagaa
ccaggatggagggaaaggtattatgaagacaagtttggtgcaagaacacctgagcaaatt
gaagaaatacgtagagatgttgttctcaaatatactgaaggtctgtgttgggtaatacac
tactattatgaaggtgtctgctcatggcaatggttttaccctcatcactatgcccctttt
gcttccgatttaaaaggtttaggccggcttaatataacttttgaacttgggtcaccattc
aaacctttcgatcagcttctgggagtattcccagcggcaagctcacatgcactccctcta
cggtatcggcagttgatgactgatccaagttcgccgataattgatttttatccgattgat
tttgaagtagatatgaatggaaagagattttcttggcaggggatagccaaactgcccttc
attgatgaagctaggttgctgtctgagattgaaaaagtcgagcatactttgacgcctgaa
gaagcaagacgaaacagtacaatgtacaatatgctttttgtgaatagcttgcacccagtt
gcgccttatatctactctctcagcagcaaattcggacatctgcccgataatgagcgaaat
gaaattaaagagccactgaagccttctgccagtggaggaatgagtggttacatctcactt
tgtggcggggatccatgttcacctgtcttcagatctcctgtggatggactggaggatatt
atggacaatcaagtgatatgctcaatctacaagcttccagatcctcataagcacatagcg
cgtccacctgctggtgttatcatgcccaagaagattgttgaagccggtgatctgaagcca
ccgcctgtgctgtggcatgaagacaatggcaggaggcctcatgatgataacagcagcagg
caaaaccctgcaggatcgatacagcagggccgccaactaggggaggccgcacaccgacta
gttgcaaacagcttgaatgttcgcggcggcgggcactaccctccggctaggccatatcaa
actataatgagtggtatgcattatccaaatggaatgccaccatggatggagcagcctgct
ggacaccctggttggcatgttcctagtgataatctaccctatggtcatgtaccagcctat
gcgctgccatcaggatcaggtcatcagtacacaagagataatcgcggaaggcaccatcca
tatgcaagagacagccacgccgattcaagaggagcgggccggcatccatctcgataccat
cagaataatagtagcaacgcatattcatcatatcctgctcctccgtcatcgggttttgga
cgatacgggcaacccccgtcgcatgctggcggctaccagcctgcgccgtatacagcaacc
caacagtggcagcagcagcaacaacctcgtagttcctattctggaggcggggcgcttcct
gcaagacctaattcacgaccgcagcagtcacagaactcctacggcagcttagataggact
tcaagcaggagaccaccaggccagggttttcctctttga
DBGET
integrated database retrieval system
