Triticum aestivum (bread wheat): 123185516
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Entry
123185516 CDS
T07757
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
taes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123185516
03015 mRNA surveillance pathway
123185516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123185516
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123185516
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
123185516
NCBI-ProteinID:
XP_044453328
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Position
1A:10453655..10457817
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AA seq
385 aa
AA seq
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MAGRRSRSPSLSSPSSRSLSSFSSVSSPSRSRSPPDRGRRSSSAARRGRSPPPPREGPKG
GRPTSPSPPPKKPSPPPPAPRKPSPAPVPDESSLVLLVSRLSRNVTEGHLREIFENYGEI
VNVELSMDKAVNLPRGYGYVEFKMRADAEKALLYMDGAQIDGNVVKVKFAPAPGQKAAVS
LPKALPNPPKRDLPETDTVVPNAEKATQQRPRELSTQRKPALSPQRRPAPSGRVDSPRRQ
PDAPPIHPWKDPPLFRRGRTPPSLRPGYPVRRRSPSPPPRRFRSPRRFSPRRGYVSPVRR
RSPFAPRRMTPPMRMRSPPRRLPPPYLRSRSPIRRPIRSLSRSISPVRGRAAPVRRGRSS
SSYSESPTPPRRGAGRVLRSRSPQR
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgccgctcccgctccccctcgctctcctccccctcctcccgctccctctcc
tccttctcctcggtctcctccccgtcccgcagccgctcccctcccgaccgcggccgccgc
agctcgtccgccgcgcggaggggccgctcgccgccgccgccgcgggaggggcccaaggga
ggccgcccgacctcgccttcgccgccgcccaagaaaccctcgcctccccctccagcaccg
aggaagccctcccccgctccggtccccgacgagtcgtcgctcgtcctcctcgtcagccgc
ctctcccgcaacgtcaccgagggccatctcagggagatcttcgagaactatggtgaaatc
gtcaatgtggagctgtccatggacaaggcggtcaatcttcctcgtgggtacggatacgtt
gagttcaagatgagagctgatgccgagaaggcgcttctttacatggatggtgctcaaatt
gatgggaatgttgttaaagtgaaattcgcacctgcaccgggccaaaaagctgctgtttct
ttgccgaaggctcttcccaatcctccgaaaagagatctgcctgagactgatacagttgtt
cctaatgctgaaaaggccactcagcagcgacccagggaattatctactcaaagaaaacca
gctctgtctccacaaaggcgacctgctccaagcggaagggttgactcacctaggcggcag
cctgatgcaccaccaattcacccttggaaagatcctcctctattcaggcgcggcagaaca
cctcctagcctgagaccaggatatccagttcgaagacggtctccctctccaccccctcga
agattcagatcaccaaggcgcttttcaccaagaagaggttatgttagtccagtccgaaga
cgttctccattcgctcctagaaggatgacacctccaatgcggatgagaagtcctcccaga
aggctgccacctccttatcttcgtagtagatctcccattcgtcgaccaattcgctccctt
tccagatcaatttctcctgtcaggggtcgagcagctcctgtgaggcgtgggcgctcatcc
tcgtcatattctgaatcaccaacgccgccaagaaggggagccggaagggtactgagaagt
cgcagccctcaaaggtag
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