KEGG   Triticum aestivum (bread wheat): 123187756
Entry
123187756         CDS       T07757                                 
Name
(RefSeq) protein transport protein SEC13 homolog B-like
  KO
K14004  protein transport protein SEC13
Organism
taes  Triticum aestivum (bread wheat)
Pathway
taes03013  Nucleocytoplasmic transport
taes04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:taes00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123187756
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    123187756
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:taes03019]
    123187756
   04131 Membrane trafficking [BR:taes04131]
    123187756
Messenger RNA biogenesis [BR:taes03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     123187756
Membrane trafficking [BR:taes04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    123187756
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    123187756
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    123187756
SSDB
Motif
Pfam: WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N Beta-prop_RIG_2nd Beta-prop_Vps41 ANAPC4_WD40 WDR55 Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_EIPR1 EIF3I NBCH_WD40 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR41 Beta-prop_NOL10_N Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 123187756
NCBI-ProteinID: XP_044455620
UniProt: A0A3B5XUE5
LinkDB
Position
1A:complement(27000513..27003883)
AA seq 305 aa
MLPHKIETGHQDVVHDIAMDYYGKRIATASSDNTIKIIGVSGTSHQQLATLSGHEGPVWQ
IAWAHPKYGSMLASCSYDGRVIIWKEGSKPDEWAQAHTFNEHKSSVNSIAWAPHELGLCL
ACGSSDGNISVFMARSDGGWETTRIDQAHPVGVTSVSWAPSMAPGALISPGPSGQFEYVQ
KLASGGCDNTVKVWKLTNGSWRMDCFPALQMHRDWVRDVAWAPNLGLPKSTIASASQDGT
VVIWTAPKEGEQWEGRVLNDFRTPVWRLSWSLTGNILAVSDGNNNVTLWKEAVDGEWQQV
TTVEP
NT seq 918 nt   +upstreamnt  +downstreamnt
atgctgcctcataagatagagactggccaccaagatgtggtgcatgacatcgcaatggat
tactacgggaagcgtattgccactgcctcctctgataacacaatcaagatcattggcgta
agtggcacctcgcaccagcaacttgctactttgagcggacacgagggcccagtctggcaa
atcgcatgggctcatcccaagtatggttcaatgcttgcatcctgcagctatgatggtcgg
gtcatcatatggaaagaagggagtaagcccgatgagtgggcacaggcacacactttcaat
gagcacaagtcttctgtcaattccattgcttgggcgcctcacgagctcggcctatgcttg
gcttgcggttcatctgatgggaacatttctgtcttcatggctcgttctgatggagggtgg
gagacgacgcgcatcgaccaggcacatccagtgggcgtcacctctgtttcctgggcccca
tcaatggcgccgggtgctctaatcagtccagggccttctgggcagttcgagtatgttcaa
aaacttgcttctggtggctgcgacaacacagtgaaggtgtggaagctcaccaacgggagt
tggaggatggactgcttccccgcccttcagatgcacagggactgggtgagagacgtcgca
tgggcaccgaacctaggcctcccaaagtccacaatcgccagcgcttctcaggatggaacc
gtcgtcatctggaccgcaccgaaggaaggtgagcagtgggaaggcagggtcctcaatgat
ttcagaacccctgtttggaggctgtcgtggtcgctgacgggcaacatcctggcggtctcc
gatggcaacaacaatgtgaccctctggaaagaagccgttgacggtgaatggcagcaagtg
actaccgtcgagccatag

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