Triticum aestivum (bread wheat): 123187914
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Entry
123187914 CDS
T07757
Name
(RefSeq) ATP-dependent RNA helicase DEAH12, chloroplastic-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123187914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123187914
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123187914
Spliceosome [BR:
taes03041
]
Complex C
Other components
Step II factors
123187914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD_DEAH11
KH_DEAH11_2nd
KH_DEAH11_1st
RRM_DEAH11
KH_DEAH11
Helicase_C
IBR
OB_NTP_bind
DEAD
IBR_1
zf-RING_UBOX
AAA_22
KH_SLS1_1
AAA_19
IBR_2
Arc_MA
zf-RING_5
zf-C3HC4_2
ResIII
ABC_tran
gp37_trimer
HA2_N
Helicase_RecD
AAA_30
AAA_29
zf-Nse
Motif
Other DBs
NCBI-GeneID:
123187914
NCBI-ProteinID:
XP_044455842
LinkDB
All DBs
Position
2A:121078040..121093637
Genome browser
AA seq
1749 aa
AA seq
DB search
MRQSNHCRPFRPPDWGSPPPHCRPHHQQSHRQPQSAPRFAVILFRAGPNISTPTATEIDA
LVADLPSPPPDNLSVFSSGRDAARLLFRSLPAAAAAARELWSLRLEGLHLLTPYLPNAAL
AAHAFPLIASLFASHASRLLDTDLVSRSAARSAELAASIQSLEHRLRSRNSFRDFDQLHL
QKKTLEAEKDSVDAKIAEYKASMSSIRRAMLRGTDEEEEVEEEGVDVFGIGEGEDVDFAR
LHMMMLRECRRLNEGLPIYAYRRKILNHIFNNQVMTLIGETGSGKSTQLVQFLADSGLAA
NGSIVCTQPRKIAATSLARRVDEESNGCYKDNFVLSYSTFLNSQDLNSKIIFCTDSCLLH
HCMNDTGLDGISYIIVDEAHERSLNTDLLLALIKKKLLDRLDLHLIIMSATADADKLADY
FYGCQAFHVKGRNFPVEINYVPDVSVEGSSNAVPNSMCDACATASYVNDVVRMVSIIHKN
EEEGAVLAFLTSQLEVEWACENFSDASAVVLPMHGKLSHVEQSRVFRSYPGKRKIIFCTN
MAETSLTIKEVKYVVDSGLAKESRFVPSSGLNVLKVNWISQSSANQRAGRAGRTGAGKCY
RLYSEADFSMMDVHQEPEIRKVHLGTAVLRILALGVKDARKFEFVDAPNPEAISMAVKNL
EQLGAVKHRLNCFELTDTGRYLVKLGIEPRLGKIMLDCFDVGLRKEGVVLAAVMANSSNI
FCRVGTDEEKHKADLQKVRLCHRDGDLFTLLAVYKKWEDGHDNRNMWCWQNSINAKTMRR
CQETISELENCLKHELNIIVPSYWRWNPEAPTVHDKDLKRIILSSLTGNLAMFLGHERFG
YQVISTGQVVNLHPSSSLLNYGIKSEWVVFTEILSVPNQYLVCVTAVDHDALYTIHPVSF
IKQLEEQKLQIKVISGLGTNLLRRFCGKYGQNQQKIISRLKEDCRDDRITVEINFQNNEV
VLFATEQNMEKVFCTVNSALECECKILRNECLERNLFPGRPGSSPIALFGSGAEIKHLEL
GGRYLTVEVLHQNAHDIDDKELIFLVDSIGSGIANFHKSTGSFRIASDGIKWGKFTFLKP
ENAEDAVSKFNGIEFNGSSLKLVPVCTFDNRGLPFPAVRAKLCWPRRHSSGRALITCASG
EAEFVVNDCFALGIGGRYIKCRVSTKYENCVFAEGIPMHVTEPELYDAFRSTTGRRILNI
RLLRVKGNAIASPSVSTCEEELVREISPFMSNKSFPGQNFRVEVFPPEENDSLTRATITF
DGSLHREAARALDHLEGHFLPCCQPWQIIQCNHVFHSTLSCPVRVYNVISQEVASLLESF
QSQKGVSYNFEKTENGIFRLKLTANATKTIADLRRPLEILMKGKTINHPDLTLSAVQLLL
SRDGVAHLKSIEQETGTYIMYDRQSLNIKVFGHQDQMAAAEVKFVHALRQLLEKKPLEIY
LRGHNLPPDLMKKTVENFGVDLEGFNKEMPEIKVELHQHRHLLKVWGSKEDKRRVERMIS
ELASFKHSSLVKLASENVGGKEDDQRVDYDEPSEDACPICLCEIEDPFRLESCGHMFCLA
CLVDQCESAMKSHDGFPICCLKTGCKEPLLVIDLKHLLSNEKLEDLFRASLRAFVASRAG
MYRFCPTPDCQSIYQVAAPDAETKPFSCGACYVEICTKCHFEYHPFISCEAYKEYKEDPD
STLLEWRKGKANVKSCPSCGYTIEKSDGCNHVECRCGSHICWVCLENFRSSEECYGHLRS
VHQSFVDIV
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaatccaatcactgccgccccttccgcccgccggactggggttctccgcctccg
cactgccgcccgcaccaccagcagagccaccgccagccgcaatcggccccgcggttcgcc
gtgatcctcttccgcgcgggccccaacatctccaccccgaccgccaccgagattgacgcg
ctcgtcgccgatctcccctcgccgccccccgacaacctctctgtattctcctccggccgc
gacgccgcacgcctcctcttccgctcccttcctgccgccgcggccgcagcgcgcgagctc
tggtcgctccgcctcgagggcctccacctcctcacaccctacctccccaatgccgcgctt
gccgcccacgccttcccactcatcgcctctctcttcgcctcccacgcctcccgcctccta
gacaccgacctcgtttcccgttcagctgcccgctccgctgagctcgcagcctccatccag
tctctggaacaccgcctgcgcagtcgcaattccttccgtgacttcgaccagctccatctc
cagaagaaaacattggaggccgagaaggactcggtagatgccaaaattgccgagtacaaa
gcgtcaatgagttccatacggcgtgccatgttacgtgggaccgatgaggaggaggaggtg
gaggaggagggagtggatgtgtttgggattggggaaggcgaggatgtggacttcgcgagg
ttgcacatgatgatgctccgtgaatgcaggagactcaacgagggattaccaatttacgca
taccgcagaaaaattctcaatcacatttttaataatcaggttatgaccttaattggggag
actggttctgggaaaagcacgcagttagttcagtttcttgctgactcaggtcttgctgct
aatggctcaattgtctgtactcaacctcgaaaaattgctgccacgtcattggcacgtaga
gtggatgaagaaagcaacggctgctacaaagacaattttgtgttgtcatattcaaccttt
ttaaattcgcaagacctcaattcgaagataatattttgcacagatagttgtcttttacat
cactgcatgaacgacacgggcctggatggcatttcatatatcattgttgatgaagctcat
gaaagaagcttgaacactgatcttcttttagccttgatcaagaagaagctgcttgatagg
ttggatttgcatctcattataatgtctgccactgctgatgctgacaaacttgctgactac
ttttatggctgtcaagcattccatgttaaagggcgaaattttcctgttgaaattaattat
gtcccagatgtatcagtggagggttcctccaatgctgtgccaaactctatgtgtgatgct
tgtgcaactgcttcttatgtcaatgatgttgtaaggatggtaagcatcattcacaagaat
gaagaagagggtgctgtccttgctttcttgacatctcagctggaagttgaatgggcttgt
gaaaatttcagcgatgccagtgccgtggtacttcctatgcatggaaagctttcccatgta
gaacagagccgtgtttttagaagctatcctggaaagagaaaaattatcttctgcacgaat
atggctgaaacatcactgacaataaaagaagtaaagtatgttgttgattctggactggcc
aaggagagcagatttgtgcccagtagtggtctcaatgtattgaaagttaattggatttcc
caaagttctgctaatcaacgtgctggtcgggcaggtcgaacaggagcagggaagtgttac
aggctttactctgaagccgacttcagtatgatggatgtgcatcaagaacctgagatcagg
aaagttcatcttggcactgctgttctaagaatacttgctttgggtgttaaagatgcacgg
aaatttgagtttgttgatgccccaaatcccgaagcaatcagtatggctgtgaagaatctt
gaacagttgggtgctgtcaaacatagacttaattgctttgagctgactgatactggacgc
tacctggtcaaattggggattgagccaaggcttgggaaaattatgcttgattgctttgat
gttggtttgaggaaggaaggtgtagttctagctgctgttatggcaaattctagcaacata
ttttgtagagtgggcaccgatgaggagaaacataaagctgaccttcagaaggtccggctg
tgtcaccgagacggagatcttttcactctacttgctgtttataagaaatgggaagatggg
catgacaacagaaatatgtggtgctggcagaacagcatcaatgccaagaccatgaggaga
tgccaggaaaccatatcagaacttgaaaactgtctaaagcatgagctgaacatcattgtc
ccaagttattggcgttggaatcccgaggctcccactgtgcatgataaggatctaaagaga
attatcctatcatcacttacaggtaatcttgccatgtttttaggacatgaaaggtttggt
taccaggtgatttcgacaggtcaggttgtgaaccttcatccctcatcctcattgctcaat
tatggcatcaagtcagagtgggttgtgtttacagaaattttgtcagtcccgaatcaatat
ttggtatgtgtaaccgctgttgatcatgatgccttgtatacaattcacccagtgtctttc
attaagcaactggaggaacaaaaattgcagataaaagtgattagtgggctcggtactaac
ttactgagaaggttttgtggcaaatatggccaaaatcagcaaaagatcatctcgcgtctc
aaggaagattgcagggatgaccgaataactgttgaaattaactttcaaaataatgaagtt
gtgttatttgctacggaacagaatatggaaaaggtcttttgcactgtcaacagtgctttg
gaatgtgaatgtaagatattgaggaacgagtgcctagagagaaatttatttcctgggagg
cctggcagttctcctattgcactatttggttcaggtgctgaaatcaagcatttggaactt
ggggggaggtatctaacagtagaggttttgcatcaaaatgcccatgatatcgatgacaag
gagcttattttcttggtggatagtattggctctggcatcgctaattttcataaatccact
ggaagttttcggatagcctcagatggaattaaatgggggaagttcacatttctgaaacct
gaaaatgctgaagatgctgtttcaaaattcaatggcatagaatttaatggttcctcatta
aaattagttcctgtatgtactttcgataatcgaggattaccatttcctgcggtgagagct
aaattatgttggccacgtagacacagcagtggacgtgcacttataacatgtgccagcggg
gaagctgaatttgttgtaaatgactgctttgccctaggaattggtggaaggtatattaag
tgcagggttagtactaagtatgagaattgtgtttttgctgaaggaattccaatgcatgtc
acagagccagaactgtatgatgcttttcgtagcacaacaggaaggagaatccttaatatc
cgtttgctcagggtcaagggaaatgccatagctagcccctctgtttctacatgtgaagaa
gaactggttagagaaatttctccattcatgtcaaataagagttttcctggacagaatttc
cgtgttgaggtgtttcctccggaggaaaatgattcactgacaagagcaactataactttt
gatggaagccttcatcgagaggctgcaagagcactggaccatcttgaagggcactttctt
ccttgttgtcaaccttggcagataatacagtgcaatcatgtgttccatagcactctgtcc
tgtccggtacgtgtttacaatgttatcagccaggaagttgcttctctgcttgagagtttc
caaagccaaaaaggtgtatcttacaattttgaaaagactgagaatggtatttttcgatta
aagctcacagcaaatgccacgaaaacaatagcagatttgagaaggccacttgagattttg
atgaaaggcaaaaccataaaccaccctgatctgacattaagtgcagttcaactgctcttg
tcccgtgatggtgtagcacatttgaaatcaattgaacaagaaactggtacttacattatg
tatgacaggcaaagtctaaatattaaagtctttggacaccaagatcagatggctgcagcg
gaggtgaaattcgttcatgcacttcgacagctacttgagaagaagcctcttgaaatttat
cttcgtggccacaacctccctccggacttgatgaagaaaacggtagaaaactttggagtt
gatctggaagggtttaacaaagagatgcctgagataaaggttgagttacaccaacaccgc
catttacttaaagtttggggcagtaaggaggataagcgaagggtggaaaggatgatctct
gagctagcctcttttaaacacagttccctggttaaacttgcatcagagaatgttggaggc
aaagaagatgatcaaagggtggattacgatgagccgtcagaggatgcatgccctatttgc
ttgtgtgagatagaagatccttttaggcttgaatcatgtgggcacatgttttgtctggct
tgtctggtggatcagtgtgaatctgccatgaaatcacatgatgggttccctatttgttgc
ctgaaaactgggtgcaaggagcctctccttgttatagacctgaagcatctcttgtcaaat
gagaagctggaggacctattcagagcttccttgagggcatttgttgcatctagagcagga
atgtaccgcttctgcccaacacctgattgccaatccatttaccaagtggcagctccagat
gcagaaaccaaacctttttcttgtggggcttgctatgtggagatatgcaccaagtgtcat
ttcgagtatcatcctttcatatcatgcgaggcttacaaagaatacaaggaagacccagac
tcgacgctgcttgaatggcgcaaagggaaggcgaatgtgaagagctgcccttcctgtgga
tacacaattgagaaatctgatggctgcaaccatgttgagtgcaggtgcggcagccacatt
tgttgggtatgcttggagaacttcaggagcagcgaggagtgttatggccatctcaggtct
gtgcaccagtcctttgtggacattgtgtaa
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integrated database retrieval system
