Triticum aestivum (bread wheat): 123187979
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Entry
123187979 CDS
T07757
Name
(RefSeq) DNA mismatch repair protein MSH4-like isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
taes03036
]
123187979
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Meiosis-specific proteins
Others
123187979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
TK
AAA_27
AAA_22
AAA_29
Motif
Other DBs
NCBI-GeneID:
123187979
NCBI-ProteinID:
XP_044455937
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Position
2A:complement(131790899..131801997)
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AA seq
811 aa
AA seq
DB search
MEEGAAGVGGGVGGGGVAGAGAGDRSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIET
SCSYHNTKTLLHFYDPNTVIVPPNKTAADGMVGVSELVDKNYQASKKVTMARGCFDDTKG
AVMVKNLSARDPSALGLDTYCKQYYLCLAAASATIKWIESEKGVIITNHSLSVTFNGSFD
HMNIDSTSVQTLEIIDPLHTELWGTSNKKKSLFQMLKTTKTTGGSRLLRANLLQPLKDIQ
TINARLDCLDELVSNEELFFGLTQGLRKFPKESDKVLCHFCFKPKKVTDEVLKPANGRKS
QLLISDIIVLKTALDAIPFLSKVLKGANSFLLQNIYQTICENPKYGSMRKRIGEVIDEDV
IHSRAPFVACTQQCFAIKPGIDGLLDVARRSFCDTSEAIHNLATKYREEFTLPNLKIPYN
NRLGFYFIIPQRDITEKLPNKFIQVVRHGKNVHCSSFELASLNVRNKSAAAECFLRTELC
LEGLISEIREDIRILTMLAEVLCLLDMIVNSFAYTISTKPVDRYTRPEFTAGDGPMAINA
GRHPILECLHTDFVPNNIFLSEASNMVLVMGPNMSGKSTYLQQICLIVILAQVGCYVPAQ
FASLRVVDRIFTRIGTGDNVENNSSTFMTEMKETAFIMQNVSSRSLVVVDELGRATSSSD
GLAIAWSCCEHLLSLKGYTVFATHMEGLSELATMYPNVKILHFEVDLRNGRLDFKFRLKD
GVRRVPHYGLLLARVAGLPASVIDTATSITSRITEQEMVRMDANCVQYQPLRMAYQAVQR
LICLKYSNQGDDYIREALQDLKESYAAGNLI
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggcgctgccggagtaggaggaggggttgggggcggcggcgtcgccggcgcc
ggcgccggcgatcgatcgagcttcgtgatcggcctcatcgagaaccgagccaaggaggtt
ggtgttgcggcatttgatttgagatcagcctcactgcacctatctcagtatatcgagacg
agctgttcataccataatacgaagacactactgcatttctatgatccgaatactgtaatt
gtgcccccaaataaaaccgcggcagatggtatggttggggtttcagagctggttgataaa
aattaccaagcaagcaaaaaggtcacaatggcacgtggttgctttgatgataccaagggg
gcggttatggtaaaaaatctgtcggctagagacccatctgcacttggtttggatacttac
tgcaagcagtactatctttgtcttgctgcggcctctgcaacaattaagtggatagaatca
gaaaaaggtgtaattattactaaccattcactatcagttacattcaacggctcatttgac
catatgaacatcgattcaactagtgttcaaacattagaaataattgaccctctccatact
gaactgtggggtactagcaacaaaaagaaaagtctctttcagatgttgaagactacaaag
actacgggagggtctagactactgagagccaacttattacagccactaaaagatattcaa
actatcaatgctcggcttgactgcttggatgagctagtgagcaacgaggaactattcttt
ggcttgacacaaggtctccgtaaatttccaaaagaatcagataaggttctctgtcacttt
tgcttcaaacccaaaaaggtcacagatgaggtactgaagcctgccaatggtcggaagagc
caattgttgatatctgacattattgttctaaaaactgctctggatgcaataccattcctc
tccaaggttctgaagggggcgaacagttttcttcttcagaacatttatcagaccatatgt
gaaaacccaaagtatgggagcatgagaaagagaatcggagaagtgattgatgaagatgtt
attcattcaagggctccttttgtagcctgcactcagcaatgtttcgctattaagccaggg
attgatggcctacttgatgttgctcgtcgatccttctgcgatacaagcgaagccatacat
aaccttgccaccaagtacagagaggagtttactctgccaaatttgaagataccgtataac
aatagactggggttttactttattataccccagagggatattactgaaaagcttcctaat
aaatttatccaggttgttaggcatgggaagaatgtccattgctcaagctttgagctagct
tcgctaaatgttaggaacaagtcggctgctgctgagtgcttcttgcgcactgaactctgt
ttagaaggacttattagtgagatcagagaagacattcgtatcttaacaatgctcgcagaa
gtattatgtcttttggacatgattgtaaattcttttgcctatacaatatctacaaagcct
gttgatcggtacactagaccggagttcacagcaggtgatggtccaatggcaatcaatgct
ggacggcatcctattctggagtgcttacatactgattttgttccaaataatatcttcctt
tccgaagcatcgaatatggttcttgtcatggggccaaacatgagtggaaaaagtacatat
cttcaacagatttgtctaatagttattcttgcgcaagtcggctgttatgtcccagctcaa
tttgcatcactgagagtggttgatcgtatatttacacgcataggcactggagataatgtt
gaaaacaactcgagcacgtttatgacagaaatgaaagagacagctttcatcatgcaaaat
gtttcttcaaggagcttggttgtagtggatgagcttggaagagctacttcttcctctgat
gggttggcaattgcatggagctgctgcgagcacctgctatccctcaaagggtacactgtg
tttgcgacacacatggagggcttgtcagagctcgcaacaatgtatccaaacgtgaagatc
ctccatttcgaggttgacttgaggaatggtcgcttggatttcaagttccggctgaaggat
ggtgtccgacgggtaccgcactatgggcttctgctagccagagtggccggcctccctgct
tcagtgatcgacaccgcgaccagtatcacttcacgtatcacagagcaggaaatggttagg
atggatgcgaactgtgtgcagtaccagccactgaggatggcgtaccaggccgtgcaacgg
ctcatctgcttgaagtactcgaaccaaggggacgactacatccgtgaagcattgcaggac
ctcaaggagagttacgccgcaggcaatttgatatga
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