Triticum aestivum (bread wheat): 123188673
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Entry
123188673 CDS
T07757
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123188673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123188673
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123188673
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123188673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
123188673
NCBI-ProteinID:
XP_044456819
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Position
2A:362290094..362291419
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AA seq
334 aa
AA seq
DB search
MCFIPNSPRAMTLDVVGGKESAPVMIGSLATPFAFLPEVSTTIPALVANGRWMLPALMSL
PGNVVVRPVWAHNLQDEVELIESLLPRFRYAAVDTEFPGTVYRPKVPAYALTEEKKYALL
KANVDGLHLIQLGLTLFDAAGRLPDLGTGGAVQYVWEFNFREFDVRRHRYAPESIELLRV
KGVDFDRTRREGIDGAALGPRLRKLLRGGLGDAGVITFSGTYDLAYLVKLMLGRGYKLPV
TPAQFESVVKAMVRKRLYDVKEMARRCPGDVDLRGGLDRVAGKLDVRRAVGEAHQAGSDS
LLTCQAFMKIRERYFVDDHELTTLAGVVAGVTVC
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcatcccgaactcaccgcgggcgatgaccctcgacgttgttggcgggaaagaa
tcggcacccgtgatgattgggtcactggcgacgcccttcgccttcttgccggaggtctcg
acaaccataccggcgctggtggcgaacgggcggtggatgttgccggcattgatgtcgctg
ccgggtaacgtggtggtgcggccagtgtgggcgcacaatctgcaggacgaggtggagcta
atcgagtcgctcctgccacgcttccggtacgccgcagtcgacacggaattcccggggacg
gtgtaccggcccaaggtgccggcgtacgcactcacggaggagaagaagtacgccctgctc
aaggcgaacgtcgacgggctgcacctgatccaactaggcctcactctgttcgacgcggcg
ggccggctcccggaccttggcaccggcggcgccgtgcagtacgtgtgggagttcaacttt
cgcgaattcgacgtccggcgccaccgctatgcacccgaatcaattgagctgctgcgggtc
aagggcgtggacttcgaccggacacgccgggagggaatcgacggggcggcgttgggcccg
cggctgcgcaagctgctgcgcggtggccttggcgatgccggggtgatcacgttcagcggc
acctacgacctggcgtacctcgtcaagctgatgctaggccgcgggtacaagctgcccgtc
acgccggcgcagttcgagagcgtcgtgaaggccatggtccgcaagaggctgtacgacgtt
aaagagatggcgcgtcgctgccctggcgacgtcgacctccgcggcgggctggaccgcgtg
gccgggaaactggacgtgaggcgggccgtcggtgaggcgcaccaggccggttccgatagc
ctgctcacgtgccaggcgttcatgaagatacgggagcgctacttcgtcgacgatcacgag
ctgacgaccctcgctggcgtggtggccggcgtcaccgtgtgctga
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