KEGG   Triticum aestivum (bread wheat): 123189139
Entry
123189139         CDS       T07757                                 
Name
(RefSeq) histone deacetylase 9-like isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
taes  Triticum aestivum (bread wheat)
Pathway
taes03082  ATP-dependent chromatin remodeling
taes03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:taes00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    123189139
   03083 Polycomb repressive complex
    123189139
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:taes03036]
    123189139
Enzymes [BR:taes01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     123189139
Chromosome and associated proteins [BR:taes03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     123189139
   HDAC complexes
    Sin3A-HDAC complex
     123189139
    BRAF-HDAC complex
     123189139
    REST complex
     123189139
    SHIP complex
     123189139
    MiDAC complex
     123189139
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     123189139
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    123189139
  Chromatin remodeling factors
   NuRD complex
    123189139
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 123189139
NCBI-ProteinID: XP_044457417
LinkDB
Position
2A:508155707..508161232
AA seq 430 aa
MLEKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPTEL
AQFHSADYVEFLHRITPDTQHLYASELTRYNLGEDCPVFDDLFEFCQIYAGGTLDAARRL
NHKTCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDMFFPGTGDIKDIGDREGRYYAINIPLKDGIDDSSFTRLFKT
IIAKVVETYLPGAIVLQCGADSLARDRLGCFNLSIEGHAECVKFVKKFKIPLLVTGGGGY
TKENVARCWAVETGVLLDTELPNEIPDNEYIEYFGPDYTLKVPNLNMDNLNSKTYLSSIK
VQVMESLRAIQHAPGVQMQEVPPDFYVPDFDEDELDPDERVDQHTQDKQVHRDDEYYEGD
NDNDHDDGGH
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgttggagaaagacaggatatcctatttctacgatggggatgttggcaatgtgtacttt
gggccaaatcacccgatgaaaccgcatcgcctttgcatgacacaccatctcgtgttatca
tatgatcttcacaagaaaatggagatatatagaccccacaaagcatatccaacagagctt
gcgcagttccattctgctgattatgtggaattcttgcaccgaataactcctgatacccag
cacttgtatgcaagtgaattaactagatacaaccttggagaggactgcccggtctttgat
gatttgtttgagttctgccaaatctatgctggaggaactctagatgcggctcgaagacta
aatcataaaacatgtgatattgctattaattgggctggtgggctgcatcatgcaaagaag
tgtgaggcgtcaggcttctgctacattaatgacctggttttgggaattctggagcttctc
aagtatcatgctagggttctctatattgacattgatgtccatcatggagatggagttgaa
gaagccttctatttcactgacagggtaatgactgtaagtttccacaagtatggtgacatg
ttctttcctggcacaggtgatattaaggatataggagacagggaaggaagatattatgca
atcaacatcccacttaaagatggcatagatgacagcagctttactcgcctttttaaaacg
attattgccaaagttgttgagacatatctgccaggtgctattgttcttcaatgtggggct
gattcattggcgcgagaccgcctagggtgtttcaatctttcaatagaaggccatgctgaa
tgtgtaaagtttgttaagaaatttaaaatcccgctgctggtgacaggaggtggtgggtac
accaaagagaatgtagcacgctgttgggctgttgaaactggggttcttctagacacagaa
ctcccaaatgagatccctgacaatgaatacattgaatacttcggtccagattatacattg
aaagtaccaaatctgaacatggacaacttgaatagtaagacgtatctcagttcaatcaaa
gtgcaagtaatggagagtttgcgggccatacaacatgcacctggcgttcagatgcaagag
gttccacccgatttctatgtcccggattttgatgaagacgagctggatcctgatgaacgt
gttgatcagcatacccaagacaagcaggttcatcgtgacgacgagtactatgaaggcgac
aacgacaatgatcacgatgacggcggacattga

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