Triticum aestivum (bread wheat): 123189540
Help
Entry
123189540 CDS
T07757
Name
(RefSeq) SWI/SNF complex subunit SWI3A homolog
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123189540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123189540
03036 Chromosome and associated proteins [BR:
taes03036
]
123189540
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123189540
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123189540
PBAF complex
123189540
GBAF(ncBAF) complex
123189540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Sharpin_PH
Acid_phosphat_B
Motif
Other DBs
NCBI-GeneID:
123189540
NCBI-ProteinID:
XP_044457913
LinkDB
All DBs
Position
2A:580475785..580482052
Genome browser
AA seq
556 aa
AA seq
DB search
MASAAGAASSGEAPPSRQPYTIPASSGWFRWDDIHETERQALPDFFGGAGGTGFGTASRN
PRIYREYRDYIINKYREDPARRLTFTEVRKALVGDATLLRKLFGFLDASGLINFSATSSR
PAAQQPGPGAVVEAPLGLQVTPRPPASYFVEERLGGVTGDGPLRLPQLTSYTDVFGEWTP
GKGPICGFCSDECKDGKVETLKDGFKVCSTCCKTNSAKKEEANKCSIVKKESSDNHASSA
WTDAETLLLLEGVLKHGDDWDLITQHVRTKNKTECIARLIQLPFGEHMLGNINNGKSDSR
FHTNQTTDGKTNHFIVKEASSQSADMVDGMQIDGEEDGADKLVEDHPSKRRRLCSSIDVT
SSLMEQLALLTTAVSPDVVAAAAAASIKALGNENPQAKKAFHLSEKEYQVKSFSSNHVQE
SDCNVGNKEAEMHGQTVPDKKTEKNFISTAYQVRAAVGTAVGAAAARAKMLVDQEEREME
LLMASIIETQLRKIQYKIKHFEELELIMDQEYTTIQQIKESLMKEWQTVLERAFQTGAPL
QRDEVLTRLFLDRSTP
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcggccggcgccgcctcctccggcgaggcgccgccgtcgcgccagccctac
accatccccgcctcgtccggttggttccgctgggacgacatccacgagacggagcgccag
gcgctcccggacttcttcggcggcgccggcggcaccggcttcgggacggcgtcgcggaac
ccccggatctaccgcgagtaccgcgactacatcatcaataagtaccgggaggaccccgcc
cgccgcctcaccttcaccgaggtccgcaaggcgctcgtcggcgacgccacgctcctccgg
aagctatttggcttcctagacgcctccggcctcatcaacttctccgccacctcctcccgc
cccgcggcgcagcagcctgggccgggcgccgtcgtagaggcgcccctggggttgcaggtg
acgccacgcccgccggcgtcctacttcgtggaggagagattgggaggagtgaccggggac
ggcccgctccgcctccctcagctgacctcgtacaccgatgtgttcggggagtggacgcct
gggaaggggcctatatgtggcttctgcagcgacgagtgcaaggacggcaaggtggaaacc
ttgaaggatggttttaaagtatgttcaacgtgttgcaaaaccaatagtgcaaagaaggag
gaagcaaataaatgctctattgttaaaaaggagagctctgacaaccatgcttccagtgca
tggacagatgcagagacgctactccttttagaaggtgtcctaaaacatggagatgactgg
gatcttattacccagcatgtccgcacaaagaataaaacagagtgcattgctaggcttatt
cagttgccttttggtgaacatatgctgggcaacataaataatggtaaatctgatagtagg
ttccatacaaaccaaactactgatggcaaaacgaaccactttattgtgaaggaggcatca
agtcagtcggccgatatggttgatggcatgcagattgatggggaggaagatggtgctgat
aaattagttgaagaccatccttcaaagcgtcggcgtttatgttcttcaatagatgtcacc
agttcattaatggagcagttagcactgctgactaccgcggtgagcccagatgttgtggct
gcagctgcagccgcatcaattaaagcattgggtaatgaaaatccccaagcaaagaaggca
tttcatctcagcgagaaagaataccaagtcaaatcattctcttctaaccatgtccaagag
agtgattgcaatgttggcaataaggaagcagaaatgcatggacagactgttcctgataag
aaaacggaaaaaaactttatttctaccgcatatcaagtgagggcagctgttggaacagct
gttggtgcagctgctgcccgcgcgaagatgcttgtggaccaggaagagcgagagatggag
cttctaatggcgtccataattgaaactcagctaagaaagatccaatacaagatcaaacac
tttgaggagctagagttgatcatggatcaggagtacaccaccatacaacaaataaaggag
tccctgatgaaggaatggcaaacggtcctggagcgagcatttcagactggagcaccgctt
cagagggacgaagtgctcacaaggctgttcctggacaggtctactccatag
DBGET
integrated database retrieval system
