Triticum aestivum (bread wheat): 123189746
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Entry
123189746 CDS
T07757
Name
(RefSeq) endoribonuclease Dicer homolog 4-like isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
taes03036
]
123189746
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123189746
microRNA pathway
RISC loading complex
123189746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
Helicase_C
DND1_DSRM
ResIII
dsrm
PAZ
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123189746
NCBI-ProteinID:
XP_044458165
LinkDB
All DBs
Position
2A:complement(612416066..612445017)
Genome browser
AA seq
1623 aa
AA seq
DB search
MGDISTAAASAGERKPKDPRTIARKYQLDLCKRALEENIIVYLGTGCGKTHIAVLLIYEL
GHLIRKPRRDVCIFLAPTVPLVLQQATVIANSTNFRVQSYYGDGKNPRNHEDWETEMGES
EVLVMTPQILLHSLRHCFIKMDSIALLIFDECHHAQAHKRHPYAQIMKEFYNNDMVKPPR
IFGMTASPVMGKGGSNKLNYTKCINSLEELLHAKVCSVDNAELESVLAFPDMEVYTYVPL
SHSNLTVTYNKELDRSKLESERILRESLYDFKDSQKKLKSLGRLHGNLVFCLQELGSFGA
LQAAKAFLSSDGDVLDRKESDMNDNSTRFKHHYLNKAISVLNCNILDGTHDDSFHLEMLE
EPFFSNKIVVLIKILSRYRLEENMKCIVFVKRITVARAIAHILQNLKGLDLWKCEFLVGR
HSGPKNMSRQKMDAIVENFSSGEVNLLIATSVGEEGLDIQTCCLVVRFDLPETVASFIQS
RGRARMTNSKYVVLLERGNHSQEKLLNDYIDGEGIMNGEIDLRTSNDVFDHLEEKSYRVE
KTGASISTACSVSLLHRYCYNLPKDMFFNPSPAFIYIDDTEGIICRVILPPNAAFRQVDG
QPCQSNDEAKRDACLEAYVKLYELGALTDFLLPGSGSGKNRASTTNGSASNSHDDESLRE
ELHEMLIPTILKPSTCKLDCPLNLHFYYIQFFPIPADRHYRIFGLFVINSLPMEAEKLEV
DLHLARGRIVKAGMKHLGTISFDEEQMMLARNFQEMFLKVLLDRSEFTVSHVMLLGNSET
LQFNSTFYLLLPIKQELYGDIFMIDWQTVKRCLSSPVFKDPTGVSAHGSYLPDESLRLLD
NMYSKTDVVGSLIFAPHIKTFFVIDVILNELNARSEYDGATYEDHYKERFGIKLSHPEQP
LLHAKQLCNLHNLLHDRLRETTEEGRELMEHFVELPPELCSLKIIGFSKDMCSSLSLLPS
LMCRLENLLVAIELKDVMLSSFSEASQISASGILEALTTERCLERISLERFEVLGDAFLK
YVVGRHNFLTYEGLDEGQLTSRRSAIVNNSHLYELSIKRNLQVYIRDQHFEPTQFIALGR
PCKVVCNADTEVNIHTDSRENCNLRCTKSHHWLHRKTIADAVESLVGAFLVEGGFKAAFA
FLHWVGIDVDFKDSSLYRVLDASSINLSLTNHTDVGELEELIGYNFKHKGLILEAFVHPS
FNKHSGGCYQKLEFLGDAVLEYLITSYLYSAYPDLKPGQITDLKSLAVSNNSLAYVAVQK
GIHKYLIKDSNYLSSAVNKFENYIRLPNSEKDLVEEPACPKVLGDIVESCVAAVLLDSGF
NLNYVWTLVLMLLKPVLSFSDMHMNPMREIRELCQSHELELGLPEPMKADGEYHVKVEVN
INSQVISSAAANRNSKVARKFAAQETLSKLKNYGYTHKNKSLEEILRDARKKEPELLGYN
EEPIKVEADISAETNNLKIGKERDANISFQNTAISIRGTLRTSSQRTAGNTMFSKDDVSI
ERNNQLKVAKQNACLPKGTTQKNIRKEYHGDMVNKTAKSFLFEVCAVSYWIPPEFELCKE
EGPSHLRRFTYKVTVQIRGPSETLLECYSDAQLHKKAAQEHAAQGALWYLRQHGYLAKDE
VRV
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacatctcgaccgcggcggcgagcgcgggggagcgcaagcccaaggacccgagg
acgatcgcgcgcaagtatcagctggatctctgcaagagggctctcgaggagaacatcata
gtgtacctaggcacgggatgcgggaagacccatatagccgtgctgctcatttacgaactt
ggccatctcattcgcaaacccagacgtgatgtctgcatcttcctcgccccaacagtcccc
cttgttctccagcaagcgacggtgattgctaattccaccaatttcagagttcaaagttac
tatggggatggtaaaaacccaagaaatcatgaggactgggagacagagatgggggaatcc
gaggttcttgtaatgactccccagattttgttgcatagtttgcggcattgtttcatcaag
atggactcaattgcacttctgatattcgatgaatgccatcacgcacaagcacacaagcgg
catccatatgcacaaattatgaaggaattctacaataatgacatggtgaagccccctcgc
atttttggcatgactgcttcaccagtaatgggaaaaggcgggtctaacaagcttaattac
accaaatgtatcaacagccttgaagaattattgcatgccaaggtctgttcggttgataat
gcagagctggaaagtgtgcttgcttttcctgatatggaggtgtacacttatgtcccgctt
agtcactctaatcttactgtaacttacaacaaagaacttgatcgctcaaagcttgagagt
gaacgcatactacgcgagagcctatacgatttcaaggattctcagaagaaactaaagtcc
ctggggaggttgcatggaaatttagtattctgtttgcaagaacttggttcgtttggagct
ctgcaagctgcaaaggctttcctttcatctgatggtgatgttttggacagaaaggagtct
gacatgaacgacaattctaccagatttaagcatcattacctaaacaaagcaatttctgtt
ctgaattgcaacatattagacggtacccatgatgattcatttcatctagagatgctagaa
gaacctttcttctcaaataaaattgtggttcttattaaaattctctcgagatacaggcta
gaggaaaacatgaagtgcatagttttcgtgaaaagaataactgttgcaagagcaatagca
catatcctccaaaatttgaaaggccttgatctttggaaatgtgagttccttgtgggacgc
cactcgggaccaaagaacatgtcaaggcagaagatggatgctattgttgaaaatttctct
tctggcgaggtgaatcttttgattgctaccagtgtaggtgaagagggtctggacattcag
acttgttgcctcgttgtgcggtttgatcttccagaaactgttgccagttttatccagtcg
aggggacgtgctcggatgacaaattctaaatatgttgttctcctggagaggggcaatcat
tctcaagaaaagttgcttaatgactatattgatggtgaaggcattatgaatggagagata
gacttgagaacttcaaatgatgtgtttgatcacctcgaggagaaaagttatcgagtggaa
aaaacgggtgcttccattagcactgcatgtagtgtatctctactgcatcgctactgctac
aaccttcccaaggacatgttcttcaatccttccccagcattcatctacattgatgacact
gaggggataatctgcagagtaattcttccaccaaatgctgcttttcgtcaagtggatggc
caaccatgccaatcaaatgacgaggctaagagggatgcatgcttagaggcatacgtgaaa
ttgtatgaattgggtgctttgacagattttcttctgcctggttcaggttcaggaaagaac
agggcatcaacaacaaacggttcagcaagcaacagtcatgatgatgaaagtctaagagaa
gagcttcatgagatgttaattcccacaattctcaaaccttcaacatgcaaactggactgt
ccattgaacttgcatttctactatattcaattctttcccataccagcagatagacattat
cggatatttggtctttttgtgatcaactcccttcctatggaagctgaaaagttggaggtt
gatttgcatctggctcgcggcaggattgtgaaagcaggaatgaaacatttagggacgata
tcatttgacgaagaacagatgatgctggcacgcaatttccaagaaatgtttctgaaggtt
ctcctggacagatctgagttcactgtatctcatgttatgttgttgggcaacagtgaaacg
ctacagtttaattcaaccttttacctgctgcttccaatcaagcaggaattgtatggtgat
atatttatgattgactggcaaacagttaagcgctgtttatcatcaccggtttttaaagat
ccaactggtgtgtctgcgcatggatcatatttgccagatgagtctttaaggcttcttgat
aatatgtacagtaaaactgatgtcgttggcagtctaatctttgctccccatattaagaca
tttttcgtcattgatgtcattctgaatgaactaaatgctagaagtgaatacgacggtgct
acttatgaagatcattacaaggaaaggtttggtatcaaactatcacatcccgagcagcca
cttctgcacgctaagcagctctgcaatctgcataatttgcttcatgaccgattacgggag
accacagaagaaggtcgtgaattgatggagcactttgtggagttgcctccagagctatgt
tctttgaagataattgggttttcgaaggatatgtgtagctccctgtctttgttaccatcg
ttgatgtgtcggttggagaatttgctggtagctattgagttgaaggatgtcatgttgtct
tcattctcagaggcttctcaaattagtgcctctggtatccttgaagcacttaccaccgaa
aggtgtttggagaggatttctttggagcgctttgaagtcttaggtgatgcttttttgaag
tatgtagttggacgtcacaactttcttacatatgaaggacttgatgaagggcaattgacc
agcagacgttctgctatagtgaataattcacatttatatgagttatcaatcaaaagaaat
ttgcaggtgtacatacgggatcaacactttgaaccgacacagttcattgcactgggaagg
ccttgtaaagttgtttgcaatgctgacacagaagtgaatatacacacagatagtcgagaa
aactgtaacttgaggtgtacaaagtcgcatcattggttgcataggaagactatagcggat
gctgttgaatcgcttgtcggagcatttcttgttgaaggtggattcaaagctgcatttgca
ttccttcactgggtgggaatagatgttgattttaaagattcatccctatatagagtatta
gatgcaagctccatcaatttatctctcacgaaccacaccgacgtcggtgagcttgaggaa
ttaatcggttacaatttcaaacacaagggtctaattctcgaagcatttgtgcatccttca
ttcaataaacattctggaggatgctaccagaaattggagttccttggagatgctgttttg
gaatatttgataacctcgtacctctactcagcttatcctgatctaaagcctggtcaaata
accgatttaaaatcgttagctgtcagtaataattcgcttgcatatgtggcagtccagaaa
ggtatccataagtatcttataaaggattcaaattatctttcgtcagcagtgaataagttt
gagaattatattagacttcccaattcagagaaagacttggtagaagaaccagcatgccca
aaggttcttggtgatattgtcgaatcttgtgttgctgcagttcttttagattcaggattc
aacctgaactacgtttggacgctagtgcttatgcttctaaagccagtgttgagcttctct
gacatgcacatgaatcccatgagagaaattcgggaactttgtcaatctcatgaacttgag
ttaggccttcccgaacctatgaaagccgatggagagtaccacgtcaaagtggaagttaac
ataaacagccaggtgataagttctgccgctgcaaaccggaattcaaaagttgctaggaag
tttgctgcacaagaaacactttctaaactgaagaattatggatacacacataaaaacaag
tcactggaagagattttgcgagatgctaggaagaaagaaccagaactactaggttataat
gaagaaccaatcaaagtcgaggctgacatatctgcagaaacgaataatctgaagataggt
aaagaaagggatgcaaacatctctttccaaaatacagcaatttctattcgtgggactctt
agaacctctagccaaagaacagcagggaataccatgttttccaaggatgatgtcagtatt
gaaaggaataatcagctcaaggttgcaaagcagaatgcctgtctgccgaagggaacaact
cagaaaaatattagaaaggagtatcatggtgatatggtaaataaaacagcaaagtctttc
ctttttgaagtatgtgccgtaagttattggataccccctgaatttgaattgtgcaaagaa
gaagggccaagccatctccgaagattcacgtacaaggttacagttcagatcaggggaccc
tcggagacactcttggagtgctacagcgatgctcaactacataagaaggccgcacaagag
catgccgcgcagggggctctgtggtatctcaggcaacatgggtacctagccaaagatgaa
gttcgtgtgtag
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integrated database retrieval system
