KEGG   Triticum aestivum (bread wheat): 123190036
Entry
123190036         CDS       T07757                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
taes  Triticum aestivum (bread wheat)
Pathway
taes03030  DNA replication
taes03410  Base excision repair
taes03420  Nucleotide excision repair
taes03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:taes00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123190036
   03410 Base excision repair
    123190036
   03420 Nucleotide excision repair
    123190036
   03430 Mismatch repair
    123190036
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:taes03032]
    123190036
   03036 Chromosome and associated proteins [BR:taes03036]
    123190036
   03400 DNA repair and recombination proteins [BR:taes03400]
    123190036
DNA replication proteins [BR:taes03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    123190036
  DNA Replication Termination Factors
   ELG1-RFC complex
    123190036
Chromosome and associated proteins [BR:taes03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    123190036
DNA repair and recombination proteins [BR:taes03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     123190036
  Check point factors
   HRAD17(Rad24)-RFC complex
    123190036
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 nSTAND_NTPase5 AAA_22 AAA_lid_RFC1 Rad17 Mg_chelatase AAA_16 Viral_helicase1 RuvB_N RCF1-5-like_lid nSTAND3 AAA_assoc_2 AAA_11 AAA_19 AAA_25 AAA_28 AAA_5 AAA_30 IstB_IS21 DNAX_ATPase_lid ABC_tran RNA_helicase AAA_3 MeaB bpMoxR AAA_18 NTPase_1
Other DBs
NCBI-GeneID: 123190036
NCBI-ProteinID: XP_044458517
LinkDB
Position
2A:complement(658543102..658547196)
AA seq 333 aa
MAASSSAAAPADTYDIPWVEKYRPSRVADVVGNADAVSRLEVIARDGNMPNLILSGPPGT
GKTTSILALAHEMLGPSYREGVLELNASDDRGLDVVRNKIKMFAQKKVTLPPGRHKIVIL
DEADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILG
RLMIVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATVSGFRFVNQENVFKVCDQPHP
LHVKSMVKNVLDGKFDEACSGLKQLYDLGYSPTDIITTLFRVIKNYDMAEFLKLELLKET
GFAHMRICDGVGSFLQLSGLLAKFALVRETAKA
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggccgcctcctcctccgccgccgcccccgccgacacgtacgacatcccgtgggtggag
aagtaccgccccagccgcgtcgccgatgtcgtcggcaacgccgacgccgtcagccgcctc
gaggtcatcgcccgcgacggcaacatgcccaacctcatcctctccgggcctccggggacc
gggaagacgacgagcatcctggcgctggcccacgagatgctcgggcccagctaccgcgag
ggagtgctcgagctcaacgcctcggacgacagggggcttgatgtggtgaggaacaagatc
aagatgttcgcgcagaagaaggtcacactgccgcccggacggcacaagatcgtcatactg
gacgaggctgacagcatgacaacaggggcacagcaagcactgagaagaaccatggagatt
tattccaacaccacaagatttgctcttgcctgcaatacttcatctaaaatcattgaaccc
atccaaagtcgctgcgctattgtccggttctcgaggctttcagatcaggagatccttggc
cgccttatgatcgtggttgctgctgagaaggtcccttatgtgccagaaggtcttgaagcc
atcatttttactgctgatggtgacatgagacaagctttgaacaatttgcaagctacagtc
agtgggttccgttttgttaatcaagaaaatgtgttcaaggtttgcgatcaaccacatccc
ttgcatgtcaagagtatggtgaaaaatgtactagatgggaagtttgatgaggcctgctct
ggcctaaagcaactctatgatttgggctactctcctactgacataatcactactctcttc
cgtgtcatcaagaactatgacatggctgaatttctgaagctggagttgctgaaggaaacc
ggatttgcgcacatgaggatctgtgacggcgtcgggtcattccttcagctttctggcctt
ctggccaagtttgctctggtgagagaaacagcaaaggcctaa

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