Triticum aestivum (bread wheat): 123190335
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Entry
123190335 CDS
T07757
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123190335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123190335
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123190335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Zn_ribbon_RanBP
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
123190335
NCBI-ProteinID:
XP_044458893
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All DBs
Position
2A:complement(697991074..697997559)
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AA seq
681 aa
AA seq
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MPRKVVSGPDYDDDYADYEDYEDDYDDYDETGYADVKPPVKEKESSKKSSNAVPVLWKCS
MCTFDNHETMVYCEMCGVFRESFVKSGKDVSIKVESVNGISNNSGTSALSNSDSTKMPAK
TSTTNFDGDSERKYASTSHDKVNSTQLASIGSSSSTGKKKQPVISDNNVPIERTPQLIAD
HFQLKEDQGSSSRASSSAQNKGSMETLSSDISQLSIERNNVNVAQPLPEEYKPEGWMLAD
QESGVLSQLNLAIVGHVDSGKSTLSGRLLHLLGKISKRDMHKNEKEAKEKGKGSFAYAWA
MDESTEERARGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNLISGATQADAAILVVDAS
TGSFESGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAIGYSKDRLEFIKVRLGS
FLRSCNFRDSAVTWIPLSAVENQNLIKSPSDARFTSWYQGSCLLDAIDCLQLPSRDVSKP
LILPICDVIKSQSTGQLAAFGKLETGAIRNGSKVLVLPCEEVATVKSIERDSSSCSIARA
GDNVAVILQGIDGSRIIPGGILCHPGFPVPVANYLELKIRVLDIAIPILIGYQVEFHIHH
VKEAARVTKIVALLDKTGKPSKTAPRFLKSKQNAVVQVMLDQAVCVEEFSKCRALGRAFL
RSSGSTIAVGIVTKIMRQDQH
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaaggttgtctccggccccgactacgacgacgactatgctgattatgaggat
tatgaggacgattatgatgattatgatgagactggatatgctgatgttaagccccctgtg
aaggagaaagaatcatcgaagaagtcttcaaatgcagtgcctgtgctttggaagtgctcc
atgtgcacattcgataatcatgaaactatggtatactgtgagatgtgtggggttttccgg
gaatctttcgtcaaatctggcaaggatgtttcgatcaaagtagaatctgtcaacggaata
tcaaacaattctgggacatctgctctgtcaaactctgattctaccaagatgccagcgaag
acttctactacaaacttcgacggtgattctgagagaaagtatgctagcacatctcatgat
aaagtcaattccacacagttggcgtctattggtagctcatcaagcactggaaaaaagaaa
caacccgtaatctctgacaataatgtgccaatcgagaggacacctcaattgattgctgat
cattttcagctaaaggaggaccagggtagtagtagtagggctagcagttctgctcagaat
aagggttccatggagacactttcttctgacataagccagctaagtatcgaaaggaataat
gtcaatgttgcacagcctttacctgaagagtataagcctgaggggtggatgctagctgat
caggagtccggggtgctgagccaactaaaccttgcaatagtgggtcatgttgattctggc
aagtcaacactctctgggagattgctacacctattagggaagatatcgaaaagagatatg
cacaaaaatgagaaggaggctaaggaaaaaggaaaggggtcatttgcttatgcatgggcc
atggatgagagtactgaagaaagggcaagaggtgtcacaatgacagtggctgtcgcctat
ttggagaccaagaaataccgtgtagttttgcttgactctcctggccacaaagatttcgtg
ccaaatttgatatctggtgcaacacaggctgatgcagctattcttgtggttgatgcatca
actggttcttttgaatctggtatggatggggaaggagggaaaagtgttgggcagacaaag
gagcatgctcagcttattagaagctttggtgttgagcaacttattgttgcagtcaacaag
atggatgctattgggtactcaaaagataggctggagttcatcaaggtacgacttggtagt
tttctgcggtcatgcaacttccgggattcagctgttacctggattcctcttagtgctgta
gagaaccagaatttgattaaatctccttcagatgctcgttttacctcctggtatcaaggg
tcgtgtctcttggatgctatagattgcttgcagcttccttctcgggatgtttcaaagccc
ctcattcttcctatatgtgatgttatcaaatctcagtcgacaggacaactggcagctttt
ggaaaattagaaactggcgctattcgaaatggttcaaaggtcttggttttaccttgtgag
gaagtggcgacagtgaaatccattgaacgagactctagttcatgcagcatagcgagagct
ggtgacaatgtggcagttattttacagggaattgatggtagtcgaataatacctggcggg
attctttgtcaccctggtttccctgtgcctgtagccaactacttggagcttaagattcga
gtgttggacatcgccatcccaattctcattggttatcaggtggagtttcacatacatcat
gtgaaggaagctgcaagagtaacgaaaatcgtggcgttgcttgacaagacaggcaagcca
agtaaaacagcaccgcggtttcttaaatcaaagcagaatgctgttgtgcaggttatgcta
gatcaagcggtctgtgtcgaggaattctcgaaatgccgagctcttggaagggcattctta
aggtcgtctggaagcacgatcgctgtcggtatagtgactaagataatgaggcaggatcag
cactag
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