Triticum aestivum (bread wheat): 123191004
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Entry
123191004 CDS
T07757
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123191004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
taes04131
]
123191004
Membrane trafficking [BR:
taes04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
123191004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
zf_RING_Vps8_fungal
zf_RING_Vps8
zf-RING_2
WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_HPS5
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
123191004
NCBI-ProteinID:
XP_044459687
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Position
2A:complement(762556818..762564038)
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AA seq
947 aa
AA seq
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MSSAARRASHPALVNGDGEYGREDEDEEEEEEGEEGDEPEEEPRLKYQRLGGSVPAILST
DAAAAIAVTDRAVLLGTHDGTLHILDFQGNQSKEIKAHTATINDISFEDREYIGSCSDDG
TVVISNLFTDEKLKFEYHRPMKAIALDPQYSRSNNRFATGGLAGQVLVLTKKSWVSGYNK
KVLREGEGPIHSMKWRTDLLAWANDAGVKVHDMKTDRGIAFIEKPKGIPRPEVLLPHLVW
QDDTVLVIGWGTSVKIAAIRTDSSQGLNGMQRSISAASSEKYVDIVGSFQTGYHISGIAP
FGDLLVMLAYIPEEDDGDKKISTSVSSRQGTAQRPEIHLVSWKNDVLTTDALPIHGYEHY
KAKDYTLAHAPFSGSSNAGGQWAAGDEPLYYIVSPKDIVVAKPRDTEDHIAWLLQHGWHE
KALAAVEAGQGRTELLDEVGTRYLDHLIIERKYAEAAQLCPKLLRGSPSAWERWVFHFAH
LRQLPVLIPYIPIENPQLSDTAYEVALVALTTNASFHELLLTTIKSWPTTLYSASPVISA
IEPQLNSSSMTGSLKEALAELYVINSQYEKALSLFAELLKPEVFEFIEKHSLHDAIHDKV
VNLMLLDGKRAVHLLIQHRDIIPPYEVVEQLLHASKSCDRKYLLHQYLHALFEVDIHAGK
DYHDMQLELYADYEPRMLLPFLRTSQHYRLDKAYEIFAQKEFVKEQVFVLGRMGNAKEAL
STIINKLEDIQEAVEFVTEQHDDELWDELIRQCLQKPEMVGMLLEHTVGNLDPLYIVSLV
PDGLEIPKLRDRLVKIVTDYRTETSLRHGCNDILKADCVNLLVKYYHEARRGVCMASMDE
EAQGARVNEGSSRTGDRSSTLRNLEMKSRTRCGARCCLCFDPLSIQDMSFIVFYCCHAYH
QSCLEGGLDSMKSNSNARDSDDGSEDDDGSPSGESRMRCVLCTTAAA
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgccgcgcggcgcgccagccacccggcgctggtaaacggggacggggagtac
gggcgggaggacgaggatgaggaggaggaggaggagggggaggagggggacgagccggag
gaggagccgcggctcaagtaccagcggctgggcgggagcgtgccggcgatcctctccacc
gacgccgccgccgccatcgccgtcaccgaccgcgccgtcctgctcggcacccacgacggc
accctccacatcctcgacttccagggcaaccagtcaaaggagatcaaggctcacacagca
accattaatgacatcagttttgaagatcgtgaatatataggaagctgctcagatgacggc
acagtagtaataagcaacctcttcactgatgagaaactcaagtttgagtaccatcgcccc
atgaaagcaattgctttagaccctcagtactcccggagcaacaatagatttgctacaggt
ggcttagcaggtcaagtacttgtgctgacaaagaagagttgggtgtcaggctataacaaa
aaggttctgcgtgagggtgaagggccgatccattctatgaagtggaggacagatcttctt
gcctgggctaatgatgcaggggtgaaagtgcatgatatgaaaacggacagaggaattgca
ttcatagagaaaccaaaaggaattcctcggccagaggttttacttcctcacttggtctgg
caggacgacacagttttagttattgggtggggaacaagtgtcaagattgctgcaattcga
acagattcatctcaaggactcaatggaatgcaaaggagtatttcagcagcaagttctgag
aagtatgttgatattgtgggctctttccaaactggctaccacatatctggaattgctcca
tttggcgatcttttggttatgcttgcttatatccccgaagaggatgatggagataaaaaa
attagtacttctgtttcttcacgccagggaacagcgcagcgtccagaaatacatcttgta
tcatggaaaaatgatgtgcttactactgatgctctgcccattcatggttatgagcactat
aaggcaaaggattacactctcgctcatgcacctttctcaggaagtagcaatgcgggtgga
cagtgggctgctggcgatgaaccgctgtattacatcgtctctcctaaggatattgtggta
gcaaagccaagagatactgaagaccatattgcgtggcttcttcaacatggttggcatgaa
aaggcattggctgcagttgaagcaggacaagggaggactgagcttcttgatgaggtgggc
acaagataccttgatcacttgatcattgaaagaaaatatgctgaagcagcgcaactctgt
ccaaagttactgcgaggatctccttcagcatgggagaggtgggtctttcactttgctcat
ctccgccagcttcctgtgttgatcccttacatacccatagagaatccacagctgagtgat
accgcttatgaggttgctcttgtagctttaactaccaatgcgtcttttcacgaacttctc
ttgactacaataaaaagttggccaactacattatactctgcttcaccagtcatatctgct
attgagccacagctcaattcctcatcgatgactggctcattaaaagaggctttagctgag
ttgtacgtgatcaacagtcaatatgaaaaggccctttctctcttcgctgaactgctgaag
cctgaagtatttgagtttatcgagaagcacagtttgcatgatgccattcatgataaggtt
gtcaatcttatgctattggatggtaaaagggcagtccatctattgatccaacatcgtgat
atcattcccccgtatgaagtcgtggagcaactgttgcatgcgagtaaaagttgcgacaga
aaatatctgttgcatcagtatttgcatgctttgtttgaggtagacatacatgctggaaaa
gattaccatgatatgcagctggagctttatgcggattatgagccaaggatgttgctaccc
ttccttcgtaccagccagcattacaggcttgacaaggcatatgaaatatttgcacaaaaa
gaatttgtcaaggagcaagtttttgttcttggtcgtatgggaaatgctaaggaagcgctt
tctacaattataaacaaactggaagacatacaggaggccgttgaatttgttacggagcaa
catgatgatgaattatgggacgaactgataagacagtgcctccaaaagcctgaaatggtt
gggatgctgttggaacatactgtcggcaatcttgaccctctgtacattgtcagtttggtt
ccagatgggctagaaatacccaaattgcgggatcgccttgtgaagattgtgacagactat
cgaacagaaacttcactgcgacatggatgcaacgatatactaaaggccgattgtgttaat
cttttggtcaaatactaccatgaggctcggcgtggggtctgcatggcaagcatggacgag
gaggcacaaggagccagagtcaatgaaggatcttcgcgaacaggcgacagatcatcgact
ttacgtaatctagagatgaaatccagaacgagatgtggtgctcgatgctgcctgtgcttc
gaccctttgtccatccaggacatgtcattcatcgtgttctattgctgccatgcgtatcac
cagtcttgcctcgaaggcggactggactcgatgaaatcaaacagcaacgcccgggacagc
gacgatgggtcggaggacgacgacggttccccctcgggcgagtctagaatgcggtgtgtg
ctgtgcaccacagccgccgcataa
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