Triticum aestivum (bread wheat): 123191014
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Entry
123191014 CDS
T07757
Name
(RefSeq) eukaryotic initiation factor 4A-III homolog B-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
taes03015
mRNA surveillance pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123191014
09122 Translation
03013 Nucleocytoplasmic transport
123191014
03015 mRNA surveillance pathway
123191014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123191014
03041 Spliceosome [BR:
taes03041
]
123191014
03009 Ribosome biogenesis [BR:
taes03009
]
123191014
03012 Translation factors [BR:
taes03012
]
123191014
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123191014
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123191014
mRNA cycle factors
Stress granule specific factors
123191014
Spliceosome [BR:
taes03041
]
Complex C
Other components
EJC/TREX
123191014
Ribosome biogenesis [BR:
taes03009
]
Eukaryotic type
90S particles
Helicases
123191014
Translation factors [BR:
taes03012
]
Eukaryotic type
Initiation factors
eIF-4
123191014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
AAA
AAA_22
Helicase_RecD
Utp25_C
Motif
Other DBs
NCBI-GeneID:
123191014
NCBI-ProteinID:
XP_044459699
LinkDB
All DBs
Position
2A:complement(762742686..762748963)
Genome browser
AA seq
404 aa
AA seq
DB search
MAAAAAGSSRRGPMDDDKLTFETSARVEFVGSFDAMGIREDLLRGIYGYGFEKPSAIQQR
AVVPIIAGRDVIAQAQSGTGKTSMVSLSVCQVIDTNIHEVQALILSPTRELATQTERVMQ
AVGNYMSVSVHACVGGKSIGEDIRKLEAGVHVVSGTPGRVCDMIKRRTLRTRAIKLLVLD
EADEMLTRGFKDQIYDVYRYLPPELQVVLISATLPHDILEITSKFMTDPVRILVKRDELT
LKGIKQFFVAVEKEEWRFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRTNNFTVSAM
HGDMPQKERDAIMSEFRSGTTHVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGR
SGRFGRKGVAINFVRKDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcgggctcctccaggcgcgggccgatggacgacgacaagctcacc
ttcgagacctcggcgcgggtggagttcgtgggaagcttcgacgcgatgggcatccgcgag
gacctgctccgcggcatctacggctacggcttcgagaagccctccgccatccagcagcgc
gccgtcgtccccatcatcgccggccgcgacgtcatcgcccaggcccagtccggcaccggc
aagacctccatggtctccctctccgtctgccaggtcatcgacaccaacatccacgaggtg
caagcattgatactgtcaccaactagggaacttgccacgcaaacagagagggtgatgcaa
gctgttgggaactacatgagtgtctctgtgcatgcctgtgtcggtggcaaaagtatcggc
gaggatattaggaagcttgaggctggagtgcatgttgtttcaggaaccccgggcagagta
tgtgatatgatcaagagaaggaccttgcgcacaagagccatcaagctcctggtcctggat
gaagccgatgagatgttgaccagaggttttaaggatcagatctatgatgtctacagatac
ctccccccagaacttcaggttgtcttgatctctgcaactctgccccatgacatcttggag
ataactagcaagttcatgactgatccagtcaggatccttgtaaagcgtgatgagttgacc
ctaaagggcatcaaacaattctttgttgctgttgagaaggaggaatggaggtttgatacg
ctgtgcgatctttatgatacactgaccatcacccaggctgtcattttctgcaataccaag
agaaaggtggattggcttactgaaaggatgcgcaccaacaactttaccgtatcagctatg
catggtgacatgcctcaaaaggaaagggatgcgattatgagtgagttcaggagtggcacg
acccatgttctgatcacaacagatgtttgggctcgagggctggatgttcagcaggtctct
cttgtcattaattatgatctcccgaataatcgtgagctttacatccatcgcatcggtcgc
tctgggcgttttgggcgcaagggtgtggcgatcaactttgtgcgcaaggacgacatccgc
atcctgagggacattgagcagtactacagcacgcagatcgacgagatgccgatgaatgtc
gccgatctgatctga
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integrated database retrieval system
