Triticum aestivum (bread wheat): 123191077
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Entry
123191077 CDS
T07757
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD-like
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03022
Basal transcription factors
taes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123191077
09124 Replication and repair
03420 Nucleotide excision repair
123191077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123191077
03036 Chromosome and associated proteins [BR:
taes03036
]
123191077
03400 DNA repair and recombination proteins [BR:
taes03400
]
123191077
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
123191077
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123191077
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123191077
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123191077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
HBB
ResIII
DEAD
NAMPT_N
AAA_11
Motif
Other DBs
NCBI-GeneID:
123191077
NCBI-ProteinID:
XP_044459780
UniProt:
A0A3B5XWS5
LinkDB
All DBs
Position
1A:complement(78850486..78856439)
Genome browser
AA seq
758 aa
AA seq
DB search
MKFDLEGLTVHFPYAAIYPEQHAYMGELKRALDARGHALLEMPTGTGKTAALISLITSYS
LANPSRPLRLLYCTRTVHEMEKTLAELRLLFSHLPPAASRSLLALGLSSRKNLCVHPQAS
ASAARDSVDTACRRLTASWVRDKAASDPESTPLCEYFESFDRAAAAGDLASFMPPGVYTL
ADLRSLGRERRICPYFLARQMVKYANVVVYSYQYLLDPKVASIVSREMQKECVVVFDEAH
NIDNVCIEALSVSVRKQTLEGAERNLRRISQEIDRFKATDANRLRAEYNRLVDGLAQRGN
LPISDAWLANPSLPDDILKEAVPGNIRKAEHFLAVLKRLVRFLDGRLETENVENEMPVSF
VASIHSQAGIDQRMLRFCYDRLHSLLLTLEITDTDEFMHIQTICDFATLIGTYSRGFSII
IEPYDDRMPEVRDPVIQLSCHDASLAIQPVFDRFQTVVITSGTLSPIDLYPRLLNFNPVI
SRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGRLLLEMASSVPDGIVC
FFVSYSYMDGIVNSWNEMGILQDIMQHKLVFIETPDVVETTLALDNYRKACDCGRGAIFF
SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILRARLEYLRETFQIKEGDFLTFDAL
RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLHDAHLNLSTDMALHTA
REFLRRMAQPYDKAGSGGKKTLLTEEDLQDMARDAMEM
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgatcttgaaggcctgacggtgcacttcccgtacgcggcgatctacccggag
cagcacgcgtacatgggcgagctcaagcgagccctggacgcgcgcggccacgcgctgctg
gagatgccgacgggcaccggcaagacggcggcgctcatctccctcatcacctcctactcc
ctcgccaacccctcccgcccgctccggctcctctactgcacccgcaccgtccacgagatg
gagaagaccctagccgagctccgtctcctcttctcccacctcccgcccgccgcctcgcgc
tccctcctcgcgctcggtctctcctcccgcaagaacctctgcgtccacccccaggcctcc
gcctccgccgcccgcgattccgtcgacacggcctgccgccgcctcaccgcgtcctgggtc
cgcgacaaggccgcctccgacccggagtccacccctctctgcgaatacttcgagtcattc
gaccgggccgcggccgccggcgacctcgcctctttcatgccccctggggtctacactctc
gccgacctccgttcgcttggccgtgagcgccggatatgcccctacttcctcgccaggcag
atggtaaaatacgccaatgtggtggtctacagctaccagtacctgcttgaccccaaggtg
gccagcattgtgtcccgggagatgcagaaagaatgcgtggttgtgtttgatgaggcgcac
aacatcgataacgtctgcattgaggcgctgagcgtcagcgtccgcaagcagacactggaa
ggtgccgagcgaaacctgcggcgcatctcgcaagagatcgataggttcaaggccaccgat
gccaataggcttcgtgctgaatacaatagactggtggatggattggcacagaggggaaac
ctgccaatatccgatgcttggcttgcaaatccatccttgcctgatgacattttgaaggag
gctgtacctggaaatatcagaaaggctgaacattttcttgctgtcttgaagagacttgtg
agattcttagatggacggcttgaaacagagaatgttgagaatgaaatgcctgtttccttt
gttgcttcaatccattcccaggctggaattgaccagagaatgctgaggttttgttatgac
cgcttacattctctattgcttacattggagataaccgacacggatgaattcatgcacatc
cagaccatttgtgactttgccacattgattggaacttattcgcgtggtttttctataata
atagaaccctatgatgatagaatgcctgaagtccgtgatcccgtgattcagctgagttgc
catgacgcttcactcgcaatacagcctgttttcgatcgattccaaactgtcgtcatcact
tcgggaactctcagcccaatcgatctgtaccctcgtcttttgaattttaatcctgttata
agcaggagcttcacaatgtctctaacaagggattgtatatgtcccatggtgttgacacga
ggaagtgatcagctacctgtgagtacaaagttcgacatgcgcagtgatcctggtgttgtg
aggaattatggccgcctcttgctagaaatggcttcttctgttcctgatggcattgtctgt
ttctttgtcagttacagctatatggatggcattgtcaacagctggaatgaaatgggtatt
ttacaggacatcatgcagcacaagttagtattcattgaaacaccagatgttgttgaaaca
acattggcccttgacaattacagaaaagcatgcgattgtggaagaggagctatcttcttc
tcagttgccaggggcaaagttgctgaaggtattgattttgatcgacactatggcagactt
gtgatcatgtttggtgttcccttccagtacacactcagcaagatattgcgtgctaggttg
gagtacctaagagaaacttttcagataaaggagggtgactttctgacatttgacgcattg
aggcaagctgctcagtgtgttggacgtgtgattcgttctaaggcagattatggaatgatg
atatttgctgacaagagatacagtcggcatgataaacggtccaaactgccgggatggata
ctgtcacacttgcacgacgcgcacctgaatctgagcaccgatatggctctccatacagcc
cgtgagttcctccggaggatggcgcagccatacgacaaggctgggagcggcgggaagaag
acgctgttgacggaggaggacctgcaggacatggctcgggacgccatggagatgtga
DBGET
integrated database retrieval system
