Triticum aestivum (bread wheat): 542978
Help
Entry
542978 CDS
T07757
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
542978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taes03400
]
542978
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
542978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
ATG17_like
Motif
Other DBs
NCBI-GeneID:
542978
NCBI-ProteinID:
XP_044448899
LinkDB
All DBs
Position
1D:156895605..156910450
Genome browser
AA seq
942 aa
AA seq
DB search
MDSEDCLPEGGKLPELKLDARQAQGFISFFKKLPKDPRAIRFFDRRDYYTAHGENATFIA
KAYYHTMTALRQLGGNSDGISSVSVSRAMFETIARNLLLDRTDHTLELYEGSGSSWRLTK
SGTPGNIGSFEDILFANNDMQFSPVTVALFPVFRDGQLYVALSFVDMTNRKLGLAEFPED
SRFTNVESALVALGCKECLLPADFEKSIDLQPLQDAISNCSILLTERKKAEFKSRDLVQD
LGRIIRGSVEPVRDLLSQFDYALGALGALVSYAELLADDTNYGNYTIEKFNLDRYMRLDS
AAVRALNIVEGKTDVNKNFSLFGLMNRTCTAGMGKRLLNKWLKQPLIDVNEINNRLDMVQ
AFAEDPELRQGLRQQLKRISDIDRLTHALRKKSANLQPVVKLYQSCSRIPYIKGVLQQYN
GQFSTSVMTRFLSSLEEWLTENRYGRFANLVETAIDLGQVDNGEYRISPLYSSDLAVLKD
ELSGVENHINNLHMHTATDLDLSVDKQLKLEKGPFGHVFRISKKDEQKVRKKLTTNYIII
ETRKDGVKFTSAKLKKLGDQYQSLLGDYTSCQKKIVDNVVQVSCTFSEVFENFAAIISEL
DVLQSFADLAISCPVPYVRPDITTSEEGDIILQGSRHPCVEAQDGVNFIPNDCTLARGKS
WFQIITGPNMGGKSTFIRQVGVNVLMAQVGSFVPCDQASISVRDCIFARVGAGDCQLRGV
STFMQEMLETASILKGASEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVTRAPTLFAT
HFHELTALANKNGDQHQHVPDLGIANYHVGAHIDPSSRKLTMLYKVEPGSCDQSFGIHVA
EFANFPEAVIALAKSKAEELEDFTSAPNLSGEPSDEVGSKRKRVFSPDDVTRGAARARLL
LEDFSALPLDEVDGSKATEMVAKLKSDFENDAASNPWLQQFL
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgaagactgcttgccggaggggggaaagctcccggagctcaagctagatgcg
aggcaagcccagggtttcatctccttcttcaagaagttgcccaaggatcctcgggccatt
cgtttctttgatcgccgggattattacactgctcatggtgagaatgcaacctttattgca
aaggcatactatcacacaatgactgccttaaggcaactgggcggtaactctgatggaatc
tcaagtgtcagtgttagcagggctatgtttgagaccattgcacgcaaccttttgttagat
aggacggaccatacactggagctctatgagggaagtgggtcaagttggaggttaacaaaa
tctggaacacctggaaacataggcagttttgaagatattctgtttgctaacaatgacatg
caattttctccggttactgttgcattgtttcctgtcttccgtgatggtcagctatatgta
gcgcttagttttgtggatatgacgaaccggaagcttgggttggctgagttccctgaagat
agtcgattcacaaatgtggaatcagcccttgttgcattaggttgcaaggagtgtcttctt
ccagcagattttgagaaatcaatagatttgcagcctcttcaggatgctattagcaattgc
agtattctactgactgaaagaaagaaggctgaatttaaatctagagatcttgtgcaggat
cttggtcgaataatcaggggttctgtcgagccagttcgtgatctcctatctcagtttgac
tatgctttgggtgcccttggagctctagtatcatatgctgagttgctagcagatgacact
aattatggaaattacacgattgagaaattcaatttggaccgctacatgcgacttgattct
gccgcggtgcgagcattgaatattgttgaaggaaaaactgatgtaaacaagaattttagt
ttgtttggtttgatgaacagaacttgcactgctgggatgggaaagcgactgcttaacaaa
tggctgaaacaacccttgatagatgtaaacgaaatcaataacagattagatatggttcag
gctttcgcagaagatccagagcttcgtcagggtcttaggcaacaacttaaaaggatatct
gatattgatcgcctaacacatgctctccgtaagaaatcagccaacctgcagcctgttgtt
aagctctaccagtcctgctctagaatcccgtacatcaagggtgttcttcaacaatacaat
ggccaattttctacatctgtaatgacaaggttccttagctctttagaagagtggctgaca
gagaaccgatatggtaggtttgctaatcttgttgagacagccattgacctcggtcaagta
gacaatggcgagtacaggatatctcccctatattcttctgatttggctgtgctgaaggat
gagctttctggagtcgaaaatcacataaacaatttgcacatgcatacagccactgatctg
gatctttctgttgataagcaattgaagctagaaaaaggcccatttggacatgtgttcaga
atctcaaagaaagatgaacagaaagtcaggaaaaagctcacaaccaattacattatcata
gaaactcgtaaagacggtgtgaagtttacaagcgccaagcttaaaaagctaggtgaccaa
taccagtcactgcttggtgattacacaagttgccagaaaaagattgtcgataatgtagtg
caagtttcatgcaccttctcagaggtatttgagaattttgctgcaattatatccgagttg
gatgttttacagagttttgctgatttggcaataagttgcccagttccttatgtaagacca
gacatcacaacatcggaggaaggagatattattctacaaggtagtcggcatccttgtgtg
gaggcccaagatggtgttaacttcataccaaatgattgcactttggcgaggggaaaaagt
tggtttcaaatcatcactgggccaaacatgggtggaaaatccacttttatacgtcaggtt
ggcgtaaatgtcttgatggcacaagttggttcctttgttccttgtgatcaggcaagcatt
agtgtgagagattgtatttttgctcgtgttggtgctggtgattgccaactccgtggtgtt
tcaacctttatgcaagagatgcttgaaacagcatccattttgaaaggtgcatctgagaaa
tctctcataattatcgatgagttgggacgaggaacttccacatatgatggatttggtctt
gcatgggctatctgtgagcatcttgtggaagtgactagggcgcctacattgtttgcaact
cattttcatgaattaactgcattagcaaataaaaatggtgatcagcaccaacatgttcca
gatttgggaattgcaaattatcatgtgggtgcacatatagacccatcaagtcggaagttg
actatgctttataaggttgaacctggttcctgcgaccaaagttttggtatccatgttgcg
gaatttgctaattttccagaagctgtcattgctcttgcaaaaagcaaagctgaagagtta
gaagactttaccagtgcacctaacttgagtggtgaacccagtgacgaggttggatcgaaa
cgcaagagggtgtttagcccagatgatgtgacgaggggagctgctcgggctcgccttttg
ttggaggatttttctgcattgcctctagatgaggtggatgggagcaaggctacggagatg
gtggccaaactgaaatcagacttcgagaacgacgcagccagtaatccctggctgcagcag
ttcctctga
DBGET
integrated database retrieval system
