KEGG   Triticum aestivum (bread wheat): 543173
Entry
543173            CDS       T07757                                 
Name
(RefSeq) histone deacetylase 6
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
taes  Triticum aestivum (bread wheat)
Pathway
taes03082  ATP-dependent chromatin remodeling
taes03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:taes00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    543173
   03083 Polycomb repressive complex
    543173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:taes03036]
    543173
Enzymes [BR:taes01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     543173
Chromosome and associated proteins [BR:taes03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     543173
   HDAC complexes
    Sin3A-HDAC complex
     543173
    BRAF-HDAC complex
     543173
    REST complex
     543173
    SHIP complex
     543173
    MiDAC complex
     543173
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     543173
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    543173
  Chromatin remodeling factors
   NuRD complex
    543173
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 543173
NCBI-ProteinID: XP_044402862
LinkDB
Position
6A:208501906..208505932
AA seq 458 aa
MAASGEGASLPSPAGGEDSRRRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLVIHYGL
HRLLELSRPFPASEADISRFHSDEYVSFLASATGNPTILDPRAVKRFNVGEDCPVFDGLF
PFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFH
RRVLYVDIDVHHGDGVEEAFFTTNRVMTVSFHKYGDFFPGTGHITDVGAGEGKHYAVNVP
LSDGIDDDTFRDLFQCIIKRVMEVYQPEVVVLQCGADSLAGDRLGCFNLSVKGHADCLRF
LRSFNIPMMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYNLHIQP
RIVENLNTTKDLENIKNMILDHLSKLEHVPNAQFHERPSDPEGPEEKEEDMDKRPAQRSR
LWSGGAYDSDTEDPDNMKTEANDLSANSIMKDASNDDL
NT seq 1377 nt   +upstreamnt  +downstreamnt
atggcggcgtccggcgagggagcgtcgctgccgtctccggcaggtggcgaggacagccgc
cgccgtcgtgtgagctacttctacgagcccacgatcggcgactactactacgggcagggc
cacccgatgaagccccaccgcatccgcatggcgcactcgctagttatccactatggtctg
caccgcctgctcgagctttcacgccccttccctgcctcggaagccgacatcagccgcttc
cactccgacgaatatgtctccttccttgcctccgcgaccggcaacccgaccatcctcgac
ccccgcgccgtcaagcgcttcaacgtcggggaggactgccccgtctttgacggactcttc
cccttctgccaggcctccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggc
gacgccgacatcaccgtgaactgggccggcgggctccaccacgccaagaagggcgaggcc
tctgggttctgctatgtcaatgacatcgtcctcgccattcttgagcttctcaagttccac
aggcgtgtgctatatgtagacattgatgttcaccatggagatggtgtggaggaggccttc
ttcactacaaaccgagtcatgacggtttctttccacaagtatggagacttctttcctgga
actggacatataactgatgttggagcgggtgaagggaaacattatgctgtaaatgtcccc
ttgagtgatggtattgatgatgacaccttccgtgatctgttccaatgcatcattaaaaga
gtaatggaggtctatcagccagaggtagttgttctccagtgtggggctgactctttggct
ggagataggttaggctgcttcaatctgtctgtgaaaggccatgcagactgtctccgtttt
ctcaggtcgttcaatattcctatgatggttttgggaggtggaggttacaccatcagaaat
gttgctcgctgttggtgctatgagactgcagttgctgttggcgttgaacctgataacaag
ttgccttataatgactattacgagtactttggccctgactataatcttcatattcaacca
agaattgtggaaaatctgaatactacaaaagacttggagaatataaagaacatgatattg
gatcatctttcaaaattagaacatgtcccaaacgctcaattccatgaaagaccatcagat
cctgaaggtccagaagagaaggaggaggatatggacaagagaccagctcagcgcagcaga
ttatggagtggaggagcttatgattctgacacagaagatcctgacaacatgaaaactgag
gctaacgacttatctgccaactctatcatgaaggatgcatcaaatgatgatttgtag

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