Triticum aestivum (bread wheat): 780627
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Entry
780627 CDS
T07757
Name
(RefSeq) histone deacetylase 15 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
taes01009
]
780627
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
780627
04131 Membrane trafficking [BR:
taes04131
]
780627
03036 Chromosome and associated proteins [BR:
taes03036
]
780627
Enzymes [BR:
taes01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
780627
Protein phosphatases and associated proteins [BR:
taes01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
780627
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
780627
Membrane trafficking [BR:
taes04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
780627
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
780627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
780627
NCBI-ProteinID:
XP_044387024
UniProt:
A0A3B6LH06
LinkDB
All DBs
Position
5B:84990055..85000389
Genome browser
AA seq
614 aa
AA seq
DB search
MTSNMRPLNSKKGEVPSDGRENCGVSDQAFHGKCQSCDGVGKPSYPRANGVSLKESGTCS
FSCDHANALLVDGPKGSPARPGHIDSADCGQHGCLHAKNESCMPCNDLQQESDREQAGDT
LDDLFFFNDEEDDDIDWEPSARLAENRWFCLNCTMPNLDEVKHCLNCHELKGSEVAAGYD
VFKTHIARAALVSANTASVLVSTAIGFDERMLLHSEMEIKPNPHPERPNRLRAIAASLAA
AGIFPSKCALVPPREITKEELVMVHTSDHVESVEQTKNMLYSYFTSDTYANGHSACAAKL
AAGLCADLASLIVSEHVQNGFALVRPPGHHAGVKQAMGFCLHNNAAVAALAAQKAGAKKV
LIVDWDVHHGNGTQEIFEGNKSVLYISLHRHEDGSFYPGTGAADEVGVLDGKGFSVNIPW
SCGGVGDNDYIFAFQHVVLPIATEFAPDITIISAGFDAARGDPLGCCDVTPAGYSQMTSM
LTACSEGKLLVILEGGYNLRSISSSATEVVKVLLGDGPSYGTDAAAPSKEGMQTVLQVLD
IQQKYWPVLVPIFASLQAQQGPTSSKYVNAENKLKRRMLTGGPGPVWWKWGSKRLLYEVL
FEGRRPRKSRAKGE
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgacatccaatatgagaccccttaacagcaaaaagggtgaggtcccttccgatggtcgt
gagaactgtggagtttctgaccaagcttttcatggcaaatgtcaaagctgcgatggtgtt
ggaaaaccatcttatcctagagcgaatggcgtttccctgaaagaaagtggaacatgcagt
tttagttgtgatcatgctaatgctttattagtagatgggcccaaaggttcgccagcaagg
ccaggacatattgacagcgcagattgtggtcagcatggttgtctgcatgccaagaatgaa
agttgcatgccttgcaatgatctgcagcaagagtctgatagagaacaagctggagatacc
ctggatgatctgtttttctttaatgatgaagaggatgatgatattgactgggaaccttct
gctcgcctggctgaaaacagatggttttgcttgaactgtacaatgccaaacttggatgag
gttaaacattgtctgaattgccatgagcttaagggatctgaggtagctgctggatatgat
gttttcaaaactcacattgcgcgggcagctttggtatctgctaacacagcatcggtactg
gtatctacagcgattggttttgatgaaagaatgttgctccacagtgagatggaaattaaa
ccaaatccacatccagaaagacccaaccgtcttcgtgcaattgctgccagtctggctgct
gcaggaatatttccctcaaagtgcgccttggtacctcctcgagaaatcactaaggaggaa
ctcgtaatggtccatacttcagatcacgtcgaaagtgtagagcagacaaagaacatgctt
tacagttacttcacttcggatacttacgcgaatggacactcggcatgtgctgccaaactt
gcagcaggcctatgcgctgatcttgctagtttgatagtgtctgagcatgtccagaacggc
tttgcactggtgagacctcctgggcatcatgctggggtaaagcaagccatgggattttgt
cttcacaacaatgcagcagtggctgcattagctgcacaaaaagcaggcgctaagaaagtc
ttgatagttgactgggatgtgcaccatggcaatggcacacaggagatatttgaagggaac
aaatcagttttgtacatatcattacatcgccatgaggatggaagcttctaccctggaact
ggagcagcagacgaggtgggagttctggatggtaaaggattctcggtaaatataccttgg
agctgtggtggcgttggagacaatgactacatctttgcttttcagcatgtggtgcttcca
atagctacagaatttgccccagacatcaccattatatctgcaggttttgatgcagcaagg
ggtgatcctttgggttgttgtgatgtcactcctgccggatactctcagatgacgtccatg
ttaactgcttgctcagaaggaaaattgttggttatacttgagggaggatacaatcttcgg
tctatatcctcatctgcaactgaagttgtcaaggtcctactcggggacggtccaagttat
ggcacagatgcagcagcaccatcaaaggagggcatgcagactgtcttacaagttctggac
attcagcaaaaatattggccagttttagttccaatctttgcatcacttcaggcgcagcag
gggccgacttcttccaaatatgttaacgctgaaaacaagctgaagagaaggatgcttacg
ggaggaccagggcctgtgtggtggaaatggggaagcaagaggcttttgtacgaagtactg
tttgagggccgtcgtcctagaaagagcagggcgaaaggagaatga
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