Thermosipho africanus: THA_1242
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Entry
THA_1242 CDS
T00797
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
taf
Thermosipho africanus
Pathway
taf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
taf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
THA_1242 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taf03021
]
THA_1242 (rpoA)
03400 DNA repair and recombination proteins [BR:
taf03400
]
THA_1242 (rpoA)
Enzymes [BR:
taf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
THA_1242 (rpoA)
Transcription machinery [BR:
taf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
THA_1242 (rpoA)
DNA repair and recombination proteins [BR:
taf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
THA_1242 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
PI3K_P85_iSH2
RNA_pol_L_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACJ75687
UniProt:
B7IHX3
LinkDB
All DBs
Position
1249155..1250147
Genome browser
AA seq
330 aa
AA seq
DB search
MEFVMPKRLKMEEHKESEDYYYARYVLSPLEKGYATTIGNTLRRVLLSSIPSLAITDVKF
VRPEKYHEFDTIEGVKEDILEILLNLKKVQLSMEDYVEDPVELTIQHKGAGEIKAGDIIV
PAGVSVTNPNLHIATLNEDADLEIKLYATIGKGFVPAAERNEKPDIGWIVLDGVYNPVLK
VNWIAENVRVGKKTDYDKLVLEIWTKKNIKPSDALKKAVKIINDHFRIIEESFGEFDEEN
DIAEVSEVSTVEEEEVVDENDILSRKIDELDLSMRALNCLKRDKIETIGDLLSRGEEELL
KIKNFGQKSLDEVKEKLMEKFGLSFGKGES
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgttatgcctaaaagacttaagatggaggagcacaaagaatcggaagattac
tattatgcacgttatgtgctttctcctcttgaaaaaggttatgctacaacaattggaaat
acattgagaagagttttgctatcttcaataccttctcttgcaataacggatgtaaaattt
gtaaggccagaaaaatatcatgaatttgatactatcgaaggtgtaaaagaagatattctt
gagattcttttaaatttaaaaaaagttcagctttcaatggaagattatgtagaagatcct
gttgagttgacaattcaacataaaggtgctggtgagataaaagcaggggatataatagtt
ccagcaggtgtgagtgtaacaaatcctaatttacatattgcaactttaaatgaagatgca
gacctagaaataaagctttatgcaactataggaaaaggatttgtacctgcagcagaaaga
aacgaaaaacctgatataggctggatagttttagatggagtttataacccagttttaaaa
gttaactggattgcagagaatgttagggttggtaaaaaaacagactatgataagttagta
ttggaaatatggacaaagaaaaacattaagccatcagatgcattaaagaaagctgttaaa
ataataaatgatcactttaggattattgaagaaagtttcggagaatttgatgaagaaaat
gatatcgctgaagtaagtgaagtaagtacagttgaggaagaagaagttgttgatgaaaat
gatattttgagtagaaaaattgatgagttagatttatcaatgcgtgcactaaattgctta
aaacgcgataaaattgaaacaattggtgatttgttgagtagaggagaagaggaactattg
aaaatcaaaaattttggtcaaaaatcacttgatgaagtaaaagaaaagttgatggaaaag
tttgggctcagcttcggaaagggggaaagttga
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