Thermosipho africanus: THA_1464
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Entry
THA_1464 CDS
T00797
Name
(GenBank) conserved hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
taf
Thermosipho africanus
Pathway
taf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THA_1464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taf03019
]
THA_1464
Messenger RNA biogenesis [BR:
taf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
THA_1464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
ACJ75907
UniProt:
B7ID30
LinkDB
All DBs
Position
1475789..1477321
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AA seq
510 aa
AA seq
DB search
MLIYILTFVGVFVGALVGYVVAKRKIEKDLLLAKKDAEHIIKEAEKEASEIKKKAVIESR
EELHKLREDWEKEKKAREEELKYAEERLIKREEMVSKREELLDKKENYIEELRKELEEKQ
RELIEKEKEIEESFEKLAGITPEQAREIVLNEAREKYEYEIAKVYSQIKTRYEEDAEKYA
KKVIADAIQRYAPEYSGEVTVSTVMLPNDDMKGRLIGREGRNIRAFEKVTGVDLIIDDTP
EMVTVSCFNPLRREIARRTIEKLVADGRIHPTRIEEMYEKAKDEVERIIKEAGQEATFVT
GVGGLHPEIVKLLGRLKFRTSYGQNVLNHSIEVALIAGLLASELGLNVEMAKRGGLLHDI
GKALDHEVEGSHTIIGAEILKRYGEKKEVINMIMAHHGEEEPMTPEAVIVAAADALSAAR
PGARREDVENYIKRLIKLEEIAKSFKYVENAYAIQAGREVRVIVQPDKVDDVLADKLSHD
IAMKIEEELQYPGVLKVVVIREKRSVAYAK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgttgatatatatattaacatttgttggtgtttttgttggagctttagttggttatgta
gtagctaaaagaaaaattgaaaaagatttgttattagctaaaaaagacgcagaacatatt
atcaaagaagctgaaaaagaagcaagtgaaatcaagaaaaaggccgttattgaatcaaga
gaggaacttcacaagcttagggaagattgggaaaaagagaaaaaggctcgtgaagaggaa
ttaaagtacgctgaagaaagacttattaaaagagaagaaatggtttcaaagcgtgaagaa
cttttagataaaaaagaaaattatatagaagagctgagaaaagaattggaagaaaaacaa
agagagttaattgagaaagaaaaagaaattgaagaaagttttgaaaaacttgcaggtatt
actccagagcaggcaagagaaattgtcttaaatgaagcgcgtgaaaagtatgagtatgaa
attgcaaaggtttattctcaaattaagacaaggtatgaagaagatgctgagaaatatgca
aaaaaggttatagcagatgcgattcaaaggtatgcacctgagtattctggagaagtaaca
gtaagtactgtgatgcttccaaatgatgatatgaagggaagacttattggtagagaaggt
agaaatataagagcattcgaaaaggttacaggcgtagatttaattatagatgatacacca
gaaatggttacagtaagttgttttaatccattgagaagggaaattgcaagaagaacaatt
gaaaagttggttgcagatggaagaatacatcctacaagaattgaagaaatgtacgagaaa
gcaaaagacgaggttgaaagaataattaaagaggcaggtcaggaagcaacatttgtaaca
ggtgttggaggattacatccagaaatagtaaaacttttaggtagattgaaatttagaaca
agttatggccagaatgtgttgaatcactctatagaagttgcacttattgctggtttatta
gcctcagaacttgggttgaatgtagaaatggcaaaacgtggaggactattgcatgacata
ggtaaagcacttgatcatgaagttgaaggctcacacactattattggtgctgaaatatta
aagagatatggtgaaaagaaagaagttattaatatgataatggctcaccatggtgaagaa
gagccgatgaccccagaagctgtaattgttgcagctgcagatgcattatctgctgcaaga
ccaggcgcaagaagagaagatgttgaaaattatattaaaaggcttattaaacttgaagag
attgcaaaaagctttaaatatgttgaaaatgcatatgcgattcaagctggtagagaagta
agggttatagtacaaccagataaagttgatgatgttttagctgataaattgtcccacgac
attgccatgaagatcgaagaagagctgcaatatccaggagttttaaaagttgtggtaatt
agagaaaaacgaagtgtagcttacgcaaagtaa
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