Thermosipho africanus: THA_1718
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Entry
THA_1718 CDS
T00797
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase 1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
taf
Thermosipho africanus
Pathway
taf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
taf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
THA_1718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taf03400
]
THA_1718
Enzymes [BR:
taf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
THA_1718
DNA repair and recombination proteins [BR:
taf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
THA_1718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ACJ76154
UniProt:
B7IDS7
LinkDB
All DBs
Position
complement(1719037..1719885)
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AA seq
282 aa
AA seq
DB search
MIRIGAHMPIGGGFKRVPKETYEIGGNAFQIFPHNPRQWKANLPKEEDIKLFKEGIKKYK
IDPEAMLCHSGYLINIASPNIETWNKSLELLILEMKICSTLGIKYLNIHPGSHLKSGVEN
GINQILKALNTAMEKEKNTFILLENVTKKGGNIGSTLEELKLIIDKAKFPDRLGITIDTC
HAFDAGYDITNKEKLNEFLNKIDKYFSLEKLKFIHLNDSKNDLGSNKDRHENIGKGKIGS
EGLKVFISHPLIQKIPWVLETPGDNDVHKKDIQEVLKILEVK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgataagaattggagcacatatgcccatcggtggtggttttaaaagagtaccgaaagaa
acatatgaaattggaggaaacgcatttcaaatatttccgcataatccacgtcaatggaaa
gctaaccttccaaaggaagaagatatcaaattatttaaagaaggtattaaaaaatacaag
attgatccagaagctatgctttgtcatagtggttaccttataaacatagcaagtccaaat
atcgaaacatggaataaatcattagagctattaatcttagaaatgaaaatatgctcaacc
ctaggtataaaatatttaaacattcatcctggaagccacttaaaaagtggagttgaaaat
ggtataaatcaaattttaaaagcattaaatacagctatggagaaagaaaaaaatactttt
atcttacttgaaaatgtaacaaaaaaaggtgggaatattggctcgacacttgaggaatta
aagttaattattgataaagctaaatttcctgatagacttggtattaccattgatacttgt
catgcttttgatgcaggatatgatataactaataaagaaaaactaaatgaatttttaaat
aagatagataaatacttttcactcgaaaaattaaaatttatacacttaaatgactcaaaa
aatgatttaggatcaaataaagacaggcatgaaaatattggaaaaggaaagataggctct
gaaggtctcaaagtttttatatcacatccacttattcaaaaaataccatgggttttagaa
acaccaggcgataatgatgttcataaaaaagatatacaagaagtactcaaaattttagag
gtgaaataa
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