Thermosipho africanus: THA_1857
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Entry
THA_1857 CDS
T00797
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
taf
Thermosipho africanus
Pathway
taf03030
DNA replication
taf03430
Mismatch repair
taf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THA_1857
03430 Mismatch repair
THA_1857
03440 Homologous recombination
THA_1857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
taf03032
]
THA_1857
03400 DNA repair and recombination proteins [BR:
taf03400
]
THA_1857
Enzymes [BR:
taf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THA_1857
DNA replication proteins [BR:
taf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
THA_1857
DNA repair and recombination proteins [BR:
taf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
THA_1857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
CSTF2_hinge
TetR_C_5-like
Motif
Other DBs
NCBI-ProteinID:
ACJ76283
UniProt:
B7IE56
LinkDB
All DBs
Position
complement(1857967..1860450)
Genome browser
AA seq
827 aa
AA seq
DB search
MITAIVSPYSFSGSILKIEDAVKYASINGARCLILCDTNFHATVKFIDICKSYGIKPIIS
FKHNNKVFYAKNTYELYELFEAYNKNDFSKISLNYIPLDEIYFAYYLPGQRYLYEIFSKF
LGCNPVEKGVLKKIYCDLQVSDYNIKSDQVLPKANKNFLEFKNVKNPIYKKRIEKEVSII
KEKNFVDYFFTVYKIVKIAKKNNIKIGPGRGSAVGSLVSYFLGITSVDPIKYDLLFERFL
NKGRNEPPDIDLDVEDTKRKLLIEKIREEFKYVYYITTFSSIGEKTLKKIAYENKISSDK
IKYLLNLPIHKSVHAAGIIISKEKINVPIKDQTIEWDMESLHKIGYIKFDLLGLKTLTIL
SELEKKFGVPRLNDQKTFHLISKGFTNGIFQLDSNLGKKVIRTIKPRNIKELSIALSLNR
PGPLKAGIDKKYANSKIENSSQKLDVLKDTNGVLIFQEQIMKIATEYANFTEEEADVFRK
AVSKKDKQIMKPLLKKLKDGLLKKLNPNIVNELIETIIEFSEYAFNKSHAIAYAHITYYL
SYFKTHFPKQFYKTILKYDSSKSEKIILELHARGFKVIPPNLTQNELENLENNIFEIPIT
LISGINEKIGKQIIKNKPYDSLQNFLHKNPNINYSIIESLIKIGSFDYLSDSRRALLVKL
KELRTGINTKMLEISSSLFGKKFSKEYKIEKSWERCDMEYTTVGFCISKPVEKFENKLAP
LSLALSRSQKIASHVSVIGGYATDGISTIKLSVPDGEYTIIPEKDFLVFQGQRKILYEIE
KLNAKEDIEKGNDYEYVSLKEKRIKIKNARPVLDEYIIFVEGEKNVY
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgattactgcaatagttagtccatattcattttcaggatcaattttaaaaattgaagac
gcagttaaatatgcaagcattaatggagcaagatgcttgattctttgtgatactaatttt
catgctactgttaaatttattgacatatgtaaaagttatggtatcaaacctattatttca
tttaaacataataataaagtattttatgcaaaaaatacatatgaattatacgaactattt
gaagcatataacaaaaatgatttttcaaaaataagcttaaattacatccctttagatgaa
atatattttgcttattatcttccaggtcaaaggtatttatacgagattttttcaaaattt
ttaggttgtaatcctgtagaaaaaggagttttaaaaaagatttactgcgacctacaagta
tcagattataacataaaatcagatcaagtacttccgaaggcaaacaaaaattttcttgaa
tttaaaaatgttaagaatcccatctacaaaaaaagaatagaaaaagaagtgtcaataata
aaagaaaaaaattttgttgattacttttttacagtttataaaatcgttaaaatagcgaaa
aagaataacataaagattggacctggacgtggaagtgccgttggttcattagtttcatac
tttcttggaataacaagcgtagaccccattaaatacgatctactgtttgaaaggtttttg
aataaaggaagaaatgaaccacctgatattgatttagatgtagaagatacaaaaagaaag
ttattaattgaaaagattagggaagaatttaaatatgtatattacattacaacattttca
agtattggagaaaaaactttaaaaaaaattgcttatgaaaataaaatatcttcagacaaa
attaaatatcttttaaatcttccaatacataaaagtgttcatgctgctggaataatcatc
tccaaagaaaagattaatgttccaataaaagatcaaacaatagaatgggatatggaatca
cttcataaaattggatatattaaatttgatctacttggtttgaaaactcttactatttta
tcagaacttgagaaaaaatttggagttccaaggttgaatgatcaaaaaacgttccattta
atctcaaaaggttttacaaatggtatatttcaacttgacagtaatttaggaaaaaaagtt
attagaaccataaaacctagaaatataaaagaattatctatagctttatcattaaacaga
cctggtcctttaaaggctggaatagataaaaaatatgctaattcaaaaattgaaaatagt
tcacagaaattagatgttctcaaagatactaatggagtattaatatttcaagaacaaata
atgaaaattgccactgaatatgcaaatttcacagaagaagaagcggatgtttttagaaag
gcggtttccaaaaaagacaagcaaattatgaaacctcttttaaaaaaattaaaagatgga
cttttgaaaaaacttaatccaaatattgtaaatgaattgatagagacaataatagaattt
tcagaatatgcttttaacaaatctcatgcaattgcttatgctcatatcacatactaccta
tcatattttaaaactcattttccaaaacagttttacaaaacaattttaaaatatgattct
tcaaaatctgaaaaaataatcttagagcttcatgcaagaggatttaaagttattccacca
aaccttactcaaaatgaattagaaaatttagaaaataatatttttgaaattcctataacc
ttaatttctggaattaatgaaaaaattggtaagcaaataattaaaaacaaaccctacgat
tcattacaaaatttcttgcacaaaaatccaaacatcaattattctattatagaatcgctt
ataaaaattggaagctttgattacctatcagatagcaggcgagcacttcttgttaagtta
aaagaattaagaaccggaattaatacaaaaatgttagaaatatctagctcactctttgga
aaaaagttttccaaagagtacaaaatagaaaaaagctgggaacgatgcgacatggaatat
acaactgtaggattttgcatttcaaaacctgtagaaaagtttgaaaataaattggctcct
ctttctttagcattatctcgaagccaaaaaattgcatcccatgtttcagtaattggtgga
tatgcaacagatggaatttctactataaaattaagtgtacctgatggtgaatatacgatt
ataccagaaaaagattttttagtctttcaaggtcaaagaaaaattttgtacgaaattgaa
aaactaaatgctaaagaagatattgaaaagggcaatgattatgaatatgtttcactcaaa
gaaaaaagaataaaaataaaaaatgcaagacctgttttagatgaatatataatcttcgta
gagggtgaaaaaaatgtttattaa
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