Thermosipho africanus: THA_211
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Entry
THA_211 CDS
T00797
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
taf
Thermosipho africanus
Pathway
taf03030
DNA replication
taf03410
Base excision repair
taf03420
Nucleotide excision repair
taf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THA_211
03410 Base excision repair
THA_211
03420 Nucleotide excision repair
THA_211
03440 Homologous recombination
THA_211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
taf03032
]
THA_211
03400 DNA repair and recombination proteins [BR:
taf03400
]
THA_211
Enzymes [BR:
taf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THA_211
DNA replication proteins [BR:
taf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
THA_211
DNA repair and recombination proteins [BR:
taf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
THA_211
NER (nucleotide excision repair)
GGR (global genome repair) factors
THA_211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACJ74716
UniProt:
B7IF52
LinkDB
All DBs
Position
complement(205306..207984)
Genome browser
AA seq
892 aa
AA seq
DB search
MGKMFLFDGTGLVYRAFYAIDQSLQTSSGLHTNAVYGLTKMLIKFLKEHISIGKDACVFV
LDSKGGSKKRKDILETYKANRPSTPDLLLEQIPYVEELVDALGIKVLKIEGFEADDIIAT
LSKKFESDFEKVNIITGDKDLLQLVSDKVFVWRVERGITDLVLYDRNKVIEKYGIYPEQF
KDYLSLVGDQIDNIPGVKGIGKKTAVSLLKKYNSLENVLKNINLLTEKLRRLLEDSKEDL
QKSIELVELIYDVPMDVEKDEIIYRGYNPDKLLKVLKKYEFSSIIKELNLQEKLEKEYIL
VDNEDKLKKLAEEIEKYKTFSIDTETTSLDPFEAKLVGISISTMEGKAYYIPVSHFGAKN
ISKSLIDKFLKQILQEKDYNIVGQNLKFDYEIFKSMGFSPNVPHFDTMIAAYLLNPDEKR
FNLEELSLKYLGYKMISFDELVNENVPLFGNDFSYVPLERAVEYSCEDADVTYRIFRKLG
RKIYENEMEKLFYEIEMPLIDVLSEMELNGVYFDEEYLKELSKKYQEKMDGIKEKVFEIA
GETFNLNSSTQVAYILFEKLNIAPYKKTATGKFSTNAEVLEELSKEHEIAKLLLEYRKYQ
KLKSTYIDSIPLSINRKTNRVHTTFHQTGTSTGRLSSSNPNLQNLPTRSEEGKEIRKAVR
PQRQDWWILGADYSQIELRVLAHVSKDENLLKAFKDDLDIHTITAAKIFGVSEMFVSEQM
RRVGKMVNFAIIYGVSPYGLSKRIGLSVSETKKIIDNYFRYYKGVFEYLKRMKDEARKKG
YVTTLFGRRRYIPQLRSKNGNRVQEGERIAVNTPIQGTAADIIKIAMINIHNRLKKENLS
SKMILQVHDELVFEVPDNELEFVKDIVKDEMENAVKLDVPLKVDVYCGKEWE
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagatgtttctatttgatggaactggattagtatacagagcattttatgctata
gatcaatctcttcaaacttcatctggcttgcatactaatgctgtatacggacttactaaa
atgcttataaaatttttaaaagagcatatcagtattggaaaagatgcttgtgtttttgtt
ttagattcaaaaggtggtagcaaaaaaagaaaggatattcttgaaacatataaagcaaat
aggccatcaacgcctgatttacttttagagcaaattccatatgtagaagaacttgttgat
gctcttggaataaaagttttaaaaatagaaggctttgaagctgatgacattattgctacg
ctttctaaaaaatttgaaagtgattttgaaaaggtaaacataataactggagataaagat
cttttacaacttgtttctgataaggtttttgtttggagagtagaaagaggaataacagat
ttggtattgtacgatagaaataaagtgattgaaaaatatggaatctacccagaacaattc
aaagattatttatctcttgtcggtgatcagattgataatatcccaggagttaaaggaata
ggaaagaaaacagctgtttcgcttttgaaaaaatataatagcttggaaaatgtattaaaa
aatattaaccttttgacggaaaaattaagaaggcttttggaagattcaaaggaagatttg
caaaaaagtatagaacttgtggagttgatatatgatgtaccaatggatgtggaaaaagat
gaaataatttatagagggtataatccagataagcttttaaaggtattaaaaaagtacgaa
ttttcatctataattaaggagttaaatttacaagaaaaattagaaaaggaatatatactg
gtagataatgaagataaattgaaaaaacttgcagaagagatagaaaaatacaaaactttt
tcaattgatacggaaacaacttcacttgatccatttgaagctaaactggttgggatctct
atttccacaatggaagggaaggcgtattatattccggtgtctcattttggagctaagaat
atttccaaaagtttaatagataaatttctaaaacaaattttgcaagagaaggattataat
atcgttggtcagaatttaaaatttgactatgagatttttaaaagcatgggtttttctcca
aatgttccgcattttgatacgatgattgcagcctatcttttaaatccagatgaaaaacgt
tttaatcttgaagagctatccttaaaatatttaggttataaaatgatctcgtttgatgaa
ttagtaaatgaaaatgtaccattgtttggaaatgacttttcgtatgttccactagaaaga
gccgttgagtattcctgtgaagatgccgatgtgacatacagaatatttagaaagcttggt
aggaagatatatgaaaatgagatggaaaagttgttttacgaaattgagatgcccttaatt
gatgttctttcagaaatggaactaaatggagtgtattttgatgaggaatatttaaaagaa
ttatcaaaaaaatatcaagaaaaaatggatggaattaaggaaaaagtttttgagatagct
ggtgaaactttcaatttaaactcttcaactcaagtagcatatatactatttgaaaaatta
aatattgctccttacaaaaaaacagcgactggtaagttttcaactaatgcggaagtttta
gaagaactttcaaaagaacatgaaattgcaaaattgttgctggagtatcgaaagtatcaa
aaattaaaaagtacatatattgattcaataccgttatctattaatcgaaaaacaaacagg
gtccatactacttttcatcaaacaggaacttctactggaagattaagtagttcaaatcca
aatttgcaaaatcttccaacaagaagcgaagaaggaaaagaaataagaaaagcagtaaga
cctcaaagacaagattggtggattttaggtgctgactattctcagatagaactaagggtt
ttagcgcatgtaagtaaagatgaaaatctacttaaagcatttaaagatgatttagatatt
catacaattactgctgccaaaatttttggtgtttcagaaatgtttgttagtgaacaaatg
agaagggttggaaagatggtgaattttgcaattatttatggagtttctccttatggtctt
tcaaagagaattggtcttagtgtttcagagactaaaaaaataatagataactattttaga
tactataaaggagtttttgaatatttaaaaaggatgaaagatgaagcaaggaaaaaaggt
tatgttacaacgctttttggaaggcgcagatatattccacagttaagatcgaaaaatggt
aatagagttcaagaaggagaaagaatagctgtaaacactccaattcaaggaacagcagct
gatataataaagatagctatgattaatattcataacagattgaagaaggaaaatctaagt
tcaaaaatgattttgcaggttcatgacgagttggtttttgaagtgcccgataatgaatta
gagtttgtaaaagatatagtaaaagatgagatggaaaatgcagtcaagctagacgttcct
ttaaaagtagatgtttattgtggaaaagagtgggaataa
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