Thermosipho africanus: THA_717
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Entry
THA_717 CDS
T00797
Name
(GenBank) ATP-dependent nuclease, subunit A, putative
Organism
taf
Thermosipho africanus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Cas_Cas4
ResIII
Viral_helicase1
DEAD
AAA_30
PDDEXK_1
AAA_11
Xpo1
Casc1_N
DUF3853
Motif
Other DBs
NCBI-ProteinID:
ACJ75187
UniProt:
B7IGH3
LinkDB
All DBs
Position
725631..728756
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AA seq
1041 aa
AA seq
DB search
MSVLEEIRKDINKNYFISASAGTGKTFTITNYYVEILKKYEKENYPEIVDEIVVVTFTRK
AAAEMKERIVKLVNEEFSQSKNKEYWSKVKNNLSRAIISTIDSFCQRILREENINAKIDP
SFSIISNAKMEKYIERAVFLTLRYVFQLFDFDEVSITCNIPSERKKQIKNYLEILKRYKD
EIRKLFVNEYKDLNKFMETLKDVLKHWRAEMKRASVPEKLFSIDEIRSKSLEVFKYMLLI
SKEIYEGYTIDNFEFDFKAVLEKTLDFLEQDEMRKKYQKKFKYIIVDEFQDTNYLQKELF
DKLHGEDNYLFYVGDRKQSIYRFRNADVSVFLETQNEFEKRGEKVLALKENYRSNYILVK
YFNFISEKKIFSKTIIKNSKNEEVDEFEVFKTISPDLYNKLWYNKEFDESIPMRVYDGEI
PALKDKNSRIKYVLVDNGGKNKKEREKSEALVAAYIIKNLVGKTMTVKEKDNYVKRKIKY
SDFVILRSTLSNQEEVYKNVFKKFNIPLHVVSSKGFFERLEIKALLNALYAVQNPNNDFY
FTQFFFSPLVLGKFGDYVKIVSKNTQLKKEGISDESLFQTAKKIKFDDEKVNKAIEVLAK
YSQLKYFIRPAEVLKGLVRELNYFEKLVYFEDFQNAILNVKKLILDASAIDQMAESFSQL
VKLIEKLSLENESEAATEDENSDSVKLMTIHASKGLEFKIVILGDIYSEEKKSNRNVMFS
KERETTYYILRKFFDDLKQETKHDERIFEAIKEFYKDGVYDKTEDRRKLYVAITRASEMF
IPIIFKDSKDNTLANYLKLSDQEKEELKGLIGDFEEVEIDVEKDINFDEESTKQVFEKKD
IPQVHLKDLNGLAYKSYISPTTLYGYLGNEKEAKEEDILLLFDEKTSEGSDIHRKLSSVN
TISQLRYLEEEKILKVKISDKLESLFKGANVISEWRVVKPFFVNDRRYMLFGIPDKVLFK
GNKIYVLDFKNVDFKNSKNIEKYKFQIKFYMYLLRDFGAPEKGYIISTKTGEFIEVSLEE
NFEEKIKAAIENFESCKKVKA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtattagaagaaattagaaaggatataaataaaaattattttatatccgcatca
gcaggaactggaaagacatttacaataacaaattattatgtggagatactgaaaaaatat
gaaaaagaaaattatccagagatagttgatgaaattgtagttgttacttttacaagaaaa
gcggcagcagaaatgaaagaaaggattgtgaaacttgtcaacgaagaattttcacagtct
aaaaataaagagtattggtcaaaagtgaaaaataatttgtcaagagccataatctctaca
atagatagtttttgccagagaattttaagagaggaaaatattaatgcaaagattgatcca
agcttttctataataagcaatgcaaagatggaaaaatacattgaaagagctgttttttta
acgttgagatatgtatttcagttgtttgattttgatgaagttagtataacttgcaatata
cctagtgaaagaaaaaagcagattaaaaattatcttgaaattttaaaaagatacaaagat
gagataagaaaattgtttgtaaatgaatataaagatcttaacaaatttatggaaactttg
aaagatgttcttaaacattggagagctgagatgaaaagggcctctgtgcctgaaaagttg
tttagtattgatgaaataaggtcaaagagtcttgaagtatttaagtacatgcttcttatt
tcaaaagagatatatgaaggatatacaatagataattttgaatttgattttaaggcggtc
ctagaaaagacattggattttcttgaacaagatgagatgagaaaaaaatatcaaaagaaa
tttaagtacatcattgttgatgaatttcaggatacaaattatctacaaaaagagcttttt
gataaacttcatggggaggataattatttattctatgttggtgatagaaaacaatcaatt
tataggttcagaaatgcagatgtctctgtgtttttagaaactcaaaatgaatttgaaaag
cgtggagaaaaagtccttgcactcaaggaaaattacagatctaattatatcttagtaaaa
tactttaactttatatccgaaaaaaagatatttagcaagactataataaaaaattctaaa
aatgaggaagtagatgaatttgaagtgtttaagacgatctctccagatttatacaacaaa
ctttggtataacaaagaatttgatgaatcaattcctatgagagtatatgatggagagatt
ccagctttaaaggataaaaattcaagaataaaatacgtgttggttgataatggtggtaaa
aataaaaaagaaagagaaaaaagtgaagcattggttgcagcgtatataataaaaaatctt
gttggtaaaactatgactgtaaaagaaaaagataattatgtaaagagaaagataaagtat
tcagattttgttattcttagatcaactcttagtaatcaagaagaggtatacaagaatgtt
tttaaaaaatttaatattccacttcacgttgtttcaagcaaaggttttttcgaaaggctt
gaaataaaggcgcttttaaatgctttgtatgctgtacaaaacccaaataatgatttttac
tttacacaatttttcttttcaccactggttcttggaaagtttggagattatgtaaagatt
gtttcaaaaaatactcaattaaaaaaagagggaatttcagatgaatctctttttcaaaca
gctaaaaagattaaatttgatgatgaaaaagtaaataaagcaattgaagtgctagcgaaa
tactcacaacttaaatactttattaggcctgctgaagttttaaaagggcttgtaagagag
ctaaactactttgaaaaactagtctattttgaagattttcaaaacgcaatattaaatgta
aaaaagcttattttagatgcatcagctattgatcagatggcagaatcgttttcacaactt
gtaaagttaattgaaaaactttctttggagaatgaatctgaagcagcaacggaagatgaa
aattcagatagtgtaaaacttatgacaatacatgcatcaaagggacttgaatttaagata
gtgattttgggggatatttattcagaagagaaaaaatctaatagaaatgtaatgttttca
aaggaaagagaaacgacatattacattttaagaaaattttttgatgatttaaaacaagaa
acaaagcatgatgaaagaatctttgaggcaataaaggaattttacaaagatggagtatac
gacaaaacagaagatagaagaaagctgtatgttgctattacaagagcctctgaaatgttt
ataccgattatatttaaggactctaaagataatacattggcaaattatctgaaactttca
gatcaggaaaaagaagaattaaaggggttaattggtgattttgaggaagtagaaattgac
gttgaaaaagatataaattttgatgaagaaagtacaaagcaagtatttgaaaagaaggat
ataccgcaagtgcaccttaaagacttaaatggactggcgtataagtcttatatttcaccg
actactttgtatggatatcttggaaatgagaaagaggcaaaagaagaagatattttactt
ttatttgatgaaaaaacttctgaaggttcagatatacacagaaaactttcttcggtaaat
actatttctcaattaagataccttgaagaggaaaagattttaaaagtgaaaatttcagat
aagttggaatcactttttaaaggagcaaatgttatttctgaatggagagttgtaaagcca
ttttttgtaaatgatagaagatacatgctttttggaattcctgataaggttttatttaaa
ggcaataagatatatgttcttgattttaaaaacgttgactttaaaaattcaaaaaatatt
gaaaaatacaaatttcaaataaagttttatatgtatcttttaagagattttggcgcacca
gaaaaaggatatattatttctacaaaaacgggagaatttatagaagttagccttgaagaa
aattttgaagaaaaaataaaagctgcaattgaaaattttgaatcttgcaagaaggtgaaa
gcatga
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