Thermosipho africanus: THA_946
Help
Entry
THA_946 CDS
T00797
Name
(GenBank) exonuclease sbcc, putative
KO
K03546
DNA repair protein SbcC/Rad50
Organism
taf
Thermosipho africanus
Brite
KEGG Orthology (KO) [BR:
taf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taf03400
]
THA_946
DNA repair and recombination proteins [BR:
taf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
THA_946
Archaeal homologous recombinant proteins
THA_946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
AAA_21
AAA_29
AAA_13
SbcC_Walker_B
DUF4201
Rho_Binding
ABC_tran
GAS
Motif
Other DBs
NCBI-ProteinID:
ACJ75405
UniProt:
B7IH41
LinkDB
All DBs
Position
complement(971982..974765)
Genome browser
AA seq
927 aa
AA seq
DB search
MIIKKVCLKNFRVHKDREFEFKPGINLLLGKNGTGKSSIFEALSVAFFSKSPRGTLNSII
TNDGSKKAQIKVEFIASDGKEYVLEKSIGQSKSSLYSKDGSLKYEGKEDISEYIKTIVGI
NEEVFNKVIYTYQNQLTDIFSKTPAERKQLFDRLFETDVYREISDKLFKVQQSYEKDLEV
NKVELEKIKLELESEEFADLEERIKSHEEKLEEVKNEIENLRAEVQNLRKRQKSLEDIIE
SYKRIKKDLQMLGKEKEHLNSKLDDLNKRLEDAKKAKDIVEKTKKGYEMYLELEKEVRRL
NTNQKELQGKKREKETLQDKRNELEKSKSVLESQISSLKEKKVEIEKRIAEKAEKISDLK
KEIFKLDEYLKNLLYDQSKLSAEIEEFNKRYEDLGKLKVELQHKHLKISEEEKLSFNRKL
LEDEISRLMQQIEEVKKNISYEDQLVQDLANLRARLENIKNVSRELSSGMCPILKEECKN
VKEKGGFEVYIVEKEKIEEEISELEESLKKLRNFKKEKEELEKILKEKEIELSNINLKLE
EIEREKESIKSIENILKTQNYEDMEKIKKEYEGKYLSLVKQISATKERKNSIEKEHEKYL
REIVEEDEKLKDINEKISLFNESFEKTSKELEQVEKSLVLYGDIEKDMESTMNSIEEKQK
EMDKLRKDFDMYKKFEKEAQMLEDILEEIKDTKKKIEESQKSASILEKELEKIHNIEEIE
SEKDNLVVDIDKRNEKLSELSQQVGKLEETVKFLIKERERKKRLENEKRELESKRNFLEE
KKKLTKEFREKLRDLGMKVSHRISDEISNLSTVNYNIMTGKVEMIEFSAENDYEVILKNF
KESVERTFSMLSGGEQVSVAIAIRAALSKILSKSDFYILDEPTINLDVERKKLLAENIEK
LFEDVKQVFIITHDEEFSHMAENIIRL
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgataattaagaaggtttgtttgaaaaattttagggtgcataaagatagagaatttgaa
tttaaaccaggtattaatcttttgcttggaaaaaatggaacggggaaaagctcgatattt
gaggcattgagtgttgcgtttttttcaaaatcaccacgcggaacgttaaattctattatt
acaaatgatggaagtaaaaaggctcaaataaaggtagaatttattgcaagcgatggaaaa
gaatacgttttggaaaaaagtataggacaaagcaaatcaagtctttattcaaaagatgga
agcttgaaatatgaagggaaagaagatatttcagaatacattaaaaccattgttggaatt
aacgaagaggtgtttaataaagtaatatatacttaccaaaatcaacttacggatattttt
tcaaaaacacctgctgagagaaagcagttatttgatagattatttgaaacagatgtgtat
agagagatatccgacaaactttttaaagttcagcaaagttatgaaaaagacttagaagtt
aataaggttgagttagaaaagataaagttagaacttgaaagcgaggaatttgctgattta
gaggaaagaataaaatcacatgaagaaaaattagaagaagttaaaaatgagatagagaac
ctaagagcagaagtacagaacctaagaaaaagacaaaaaagtttagaggatataatagaa
agttataaaagaataaaaaaggacttgcaaatgctgggaaaagaaaaagaacatttaaat
agcaaattagatgatttaaataaaagattagaggatgcaaaaaaagccaaggatattgtt
gaaaaaacaaaaaaaggatatgaaatgtatttagagcttgaaaaagaggtaagaagatta
aataccaatcaaaaggaacttcaagggaaaaagcgtgaaaaagaaacgcttcaagataaa
aggaatgaattagaaaaaagtaaaagtgtattagaatctcaaattagtagtttaaaagaa
aaaaaggtagaaattgaaaaaagaatagctgaaaaggctgaaaaaattagtgatttaaaa
aaagagatttttaagttagatgaatatttgaaaaatcttttgtatgatcaatctaaactt
tctgcagaaatagaggagtttaataaaagatatgaagatctagggaaactcaaagtagaa
ttacagcataaacatttaaaaatttcagaagaagaaaagctttcttttaataggaagttg
cttgaagatgagatttcaaggttaatgcaacagatagaagaagtaaagaaaaatataagt
tatgaagatcaattagtccaagatcttgcaaatttgcgtgcaagacttgaaaatataaaa
aatgtaagtcgtgaattatctagtggaatgtgtccgatattgaaggaagagtgtaaaaat
gtaaaggaaaaaggaggatttgaggtatatatcgttgaaaaggaaaaaatagaggaggaa
atatctgagcttgaagaaagtctaaaaaagttaagaaatttcaaaaaagagaaagaagaa
ttagagaaaattctaaaagaaaaagaaatagaactttctaatataaatttaaaacttgag
gaaattgaaagggaaaaggaaagtataaagagtatagaaaatattcttaaaactcaaaac
tatgaagatatggaaaaaataaagaaagaatatgagggaaaatatttatctttggtaaag
caaatttcagccacaaaagagagaaaaaacagcattgaaaaagaacatgaaaaatattta
agagaaattgtagaagaagatgaaaagttaaaggacataaatgaaaaaatatcattattt
aacgaaagttttgagaaaacctcaaaggaactagagcaagttgaaaaaagcctggtatta
tatggtgatattgaaaaagatatggaaagtacaatgaactctatagaagaaaaacaaaaa
gagatggataagttaagaaaagattttgatatgtataaaaaatttgaaaaggaagctcag
atgctagaagatatattagaagaaattaaagatacaaagaaaaagatagaagaaagtcaa
aaatcggctagtattcttgaaaaagaattagaaaagattcacaatatagaagaaatagaa
agtgaaaaagataatttagttgtagatattgataaaagaaatgaaaaattatcggaactt
tcacagcaagtaggaaaattagaggaaactgtaaagtttcttattaaggaaagagaaaga
aagaaaaggcttgaaaatgaaaaaagagagcttgaatctaagagaaattttttagaagag
aagaaaaaattgacaaaagaatttagagaaaaattaagagatttgggaatgaaggtatct
cacaggatttcagatgagatttctaatctttcaactgtaaactacaatataatgaccggg
aaagtagaaatgatagaattctctgcggaaaatgattatgaagttattctaaaaaatttt
aaagaatcagtagagagaacattttcgatgctctcaggtggagagcaggtaagtgttgca
attgccattagggccgctctttcaaagatcctttcaaaatcagatttttatatacttgat
gagcctaccattaaccttgatgttgaaaggaaaaagcttcttgcagaaaacatagaaaag
ttatttgaagatgtaaagcaagtgtttataataacccacgatgaagaattcagccacatg
gcagaaaatattataagactttaa
DBGET
integrated database retrieval system
