Thermosipho africanus: THA_971
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Entry
THA_971 CDS
T00797
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
taf
Thermosipho africanus
Pathway
taf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THA_971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taf03019
]
THA_971
03009 Ribosome biogenesis [BR:
taf03009
]
THA_971
Enzymes [BR:
taf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
THA_971
Messenger RNA biogenesis [BR:
taf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
THA_971
Ribosome biogenesis [BR:
taf03009
]
Prokaryotic type
rRNA helicases
THA_971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
NAT10_TcmA_helicase
AAA_30
DeaD_dimer
AAA_19
AAA_7
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ACJ75430
UniProt:
B7IH66
LinkDB
All DBs
Position
complement(998554..1000104)
Genome browser
AA seq
516 aa
AA seq
DB search
MNFEDFNLSEKTLRAINEKGFENPTPVQEKVIPTLLKKEKNLIVQAKTGTGKTAAFGIPL
IELLENKGYVQAIILTPTRELALQVSEEINSLKRKKLKILPIYGGQSIQRQIDHLRKGVD
IVVGTPGRILDHLERGTIDLSKVDYFILDEADEMLDMGFIDDVEKILKSTSDDKFFLMFS
ATIPKRIIDLAKKYIKNYEVIKIQDKQLTTNLTEQIYIELRESDKFEALCRIIDMEEEFY
GMVFCRTKVEVDTVSSKLIERGYDAEALHGDFSQYQRERVLKKFREKKVNILVATDVAAR
GIDITGLTHVINYSIPLNPEHYVHRIGRTGRAGKEGIAITFVTPREYRQLFRIKKFSNAK
IKEGKVPSVDQIIKTKAKKIKKQVVENNSKKHDIYYELAKELLNELPAEEVVATLLSMGY
KSLNPESYNNISQISSKKEEVVRLFIALGKQSGINKKQLIDYIVKNTGISSKVISDITVL
DKFSFITVPYREAEIILSVFKKRGRRSIVSKARARN
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgaattttgaggattttaacttgagtgaaaaaacgttgagggcaatcaacgagaaagga
tttgaaaatccaacgccagtacaggaaaaggtaatacctacactcttgaaaaaggagaag
aatttaatagtacaggcaaagactggaacaggaaagactgcagcatttggaataccttta
attgaactactagaaaacaaaggatatgttcaagcgatcattttaacaccgactagagag
cttgcactccaggtttctgaagagattaattctctaaagcgaaaaaaattaaaaattctt
ccaatatacggtggtcaatctattcaaagacagattgatcatttgagaaaaggtgtagat
atagtcgttggaactccgggaagaatattggatcatcttgaaaggggaacaatagacctt
tcaaaagtggattattttattttagatgaagcagacgaaatgcttgacatgggatttatt
gatgatgtcgagaaaatattaaagagcacatctgatgataaatttttcttgatgttctct
gcaacaattccaaagagaataattgatcttgcaaaaaagtatataaaaaattatgaggtt
ataaagattcaggataagcagttgacaacaaatttaacggaacaaatatatattgaacta
agagaaagtgataaatttgaggcgttgtgtagaataatagacatggaagaagaattctat
ggaatggtattttgtagaacaaaagttgaggttgatactgtatcatcaaaattaattgaa
agaggatatgatgccgaagcacttcatggagatttctctcaatatcaaagggaaagagta
ttaaaaaaattcagggaaaagaaggttaatattcttgttgcaaccgatgttgctgcacgt
ggaattgatataacaggcttaacacacgttattaattattcaattcctttgaatcctgaa
cattacgttcacagaataggaagaacaggaagagccgggaaagaaggtattgcgataact
tttgtaactccaagggaatatagacaattatttagaataaagaagttttctaacgcaaag
ataaaggaaggaaaagttccatctgtggatcagattattaagacaaaagcgaaaaagata
aaaaaacaagttgttgaaaataattcaaaaaagcatgatatttactatgaacttgcaaaa
gaacttctcaatgaacttcctgccgaagaggttgttgcaacgttacttagtatggggtat
aaatctttaaacccagaaagttacaataatatttctcaaatttcttcaaagaaagaagaa
gttgtaagattatttattgcgcttggaaaacaatctggaattaacaaaaagcaattgatt
gattacatagttaaaaataccggtatatcaagtaaagttataagtgatattacggtatta
gataaattttcctttattacagttccttacagagaggctgaaataattctttccgtcttt
aaaaagagaggacgaagatcaatagtatcaaaagcaagggcgagaaactag
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