Thermosipho africanus: THA_998
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Entry
THA_998 CDS
T00797
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
taf
Thermosipho africanus
Pathway
taf03420
Nucleotide excision repair
taf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
taf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
THA_998
03430 Mismatch repair
THA_998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taf03400
]
THA_998
Enzymes [BR:
taf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
THA_998
DNA repair and recombination proteins [BR:
taf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
THA_998
MMR (mismatch excision repair)
Other MMR factors
THA_998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
AAA_12
AAA_11
DEAD
NPHP3_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACJ75457
UniProt:
B7IH93
LinkDB
All DBs
Position
1023624..1025522
Genome browser
AA seq
632 aa
AA seq
DB search
MIDFKAELDDEQYEAVVNSKGKTLVIAGPGSGKTRVITYKIAHLISSGVKPSEILLVTFT
KAAAKEMLQRAKLVSRSTLDGITAGTFHHICNLFLRKYGTIIGLKPNFTILDSEDAKDVM
ESARSQIIPKSESKTVPNAKQLLIINSYMNNTLCSLREAIAKYNPRYLEQESLIEQILIK
YQQEKMQQNSVDYDDLLINTLQILSTNKAIRLKESNRYKWILVDEFQDTNIVQFQIVNLL
SEVHGNLMVVGDDAQSIYSFRGARFENVLDFQKEAKIFKIQTNYRSSQEIVNLINEMLPK
NSIHKTLRAKRSTGVKPFLVQVFDHYDEADFVANEILNYNKQGVSLNDIAVLYRAHSHSL
ELQLELSKHGIPFKLYSGLRFTETAHVKDCLAFLKVSVNYEEKISWIRLLKLAKGIGKIK
SNNISEKLASKGLDAFNEIKEKSSDFNKIKEIILKSQEIKNPGERIKIFYEEFYEEKMEE
IFDDARDRKEDVVRLIEMASFYETPENFLSDILVSESYEIAQEGKSDKETEKVTLTTVHQ
AKGLEWKVVFILSVNPGDFPHIMSLKDGALDEEERLFYVAITRAKDFLYIIYSAGGSSRI
FYGNDYIIRRGKSFIDDIPFHLVEHLEYGVGR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgatagattttaaagccgaacttgacgatgaacaatatgaagcggtcgtaaactcgaaa
ggaaaaacacttgtaatcgcaggaccaggaagtggaaaaacaagggtgataacatacaaa
atagcccacttaatatcttccggtgtaaaaccttctgaaatactacttgttacatttaca
aaagcagcagcaaaagaaatgctacagagagcaaaacttgtttcacgttctacacttgat
ggaatcactgcaggaacattccaccatatatgcaatttatttctaagaaaatacggaaca
ataataggactaaaaccaaactttacaatactagacagtgaagatgcaaaagatgtaatg
gaaagtgcaagaagtcaaataattccaaaatctgaaagcaaaactgttccaaatgcaaag
caactattaatcataaactcctatatgaataacactctatgttctctaagagaagctatt
gcaaaatacaatccaagatatctagaacaagaaagcttaatagaacagatcctaataaaa
tatcaacaagaaaaaatgcagcaaaattcggttgactatgacgatcttttaattaacacc
ttacaaattctatctaccaacaaagcaattagattaaaagaatcaaacagatataaatgg
atacttgttgacgaatttcaagacactaacatagttcaatttcaaattgtaaacttactt
tcagaagtacatggaaatctcatggtcgttggagacgacgcacaaagtatatactcgttc
agaggtgcgcgctttgaaaatgtacttgactttcaaaaagaggcaaaaatattcaagatt
caaaccaactatagaagctcacaagagatagtaaaccttataaatgaaatgcttccaaaa
aactccatacacaaaacgttgcgtgcaaaaagaagtacaggagtaaaaccatttttagta
caggtgtttgaccactacgacgaagctgattttgtggcaaatgaaatactaaactacaac
aagcaaggtgtctctctaaacgatatagccgtactttatagagcccattctcactcactt
gaacttcaacttgaactatcaaaacatggtataccattcaaactttattctggtctaaga
tttacagaaacagcacacgtaaaagattgtcttgcattcttaaaagtttctgtaaactat
gaagaaaaaatatcctggataagattactaaaacttgcaaaaggaataggaaaaataaaa
tcaaacaatatatctgaaaaacttgcatctaaaggactagatgcatttaacgagatcaaa
gaaaaaagctctgactttaacaaaataaaagaaatcatattaaaatcacaagaaattaaa
aatccaggggaaagaattaaaattttctatgaggaattctacgaggaaaagatggaagaa
atatttgacgatgcaagggacagaaaagaagacgtagtaagactaatagaaatggcctca
ttctatgaaacacctgaaaactttctatctgatatacttgtaagtgaaagttatgagata
gcacaagaaggtaaatctgataaggaaaccgaaaaagtaactttaacaactgtacaccaa
gctaaaggtcttgaatggaaagtagtattcattttaagtgtaaatccaggggattttcca
cacataatgagtttaaaagatggagcattagacgaagaagaaagattgttctacgttgca
attactcgtgcaaaagattttctctatataatctacagcgctggaggttcatcaagaatc
ttttacggaaatgattacattattagacgtggcaaaagctttattgatgatattccattt
catcttgttgaacacctagaatatggagttggaagatga
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