Thermosphaera aggregans: Tagg_0170
Help
Entry
Tagg_0170 CDS
T01237
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tag
Thermosphaera aggregans
Brite
KEGG Orthology (KO) [BR:
tag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tag03032
]
Tagg_0170
03400 DNA repair and recombination proteins [BR:
tag03400
]
Tagg_0170
Enzymes [BR:
tag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Tagg_0170
DNA replication proteins [BR:
tag03032
]
Prokaryotic type
DNA Topoisomerases
Tagg_0170
DNA repair and recombination proteins [BR:
tag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Tagg_0170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
PIN_12
Motif
Other DBs
NCBI-ProteinID:
ADG90450
UniProt:
D5U000
LinkDB
All DBs
Position
152224..154284
Genome browser
AA seq
686 aa
AA seq
DB search
MNNIYSTIGRGPGFTSIWDLKGKVLVIAEKPKAARKIAEALSQRYFVRNINDVTYFEIRD
GPRQIIVASSVGHLYGLTTQEEGYPVYTYQWVPLYVVEKKKAHSYNYLEALRKLCTTSNY
FVNACDYDIEGSVIGYLIIKFNGDPGRAYRAKFSSLTLSELREAFRRLTQLDYEMIEAGL
CRHELDWLWGINVSRAIMRTVESFSKKKIILSAGRVQTPTLKYVSDIEKERNLFIPIPVY
SVVPTIVKDGVKITLELINSPIRTKKDAYALAERIRREGFLTVESYVEHTTSVAPPPPFN
LGDLQEEAARIYGYSPSKTQSIAEQLYLDALISYPRTNSQKLPSGLDFKSLLTKISQISN
YSALVSDLLKETKGYLKPVEGDKEDPAHPAIYPTGVRPVKLSSEQWAVYDLIVRRFLAAF
AGNAIIYRSTAKFALPGENIVFQATGQGIEDLGWYKYYPFHKPSVKVLPRFRNGERVEVV
EVSVKTAYTRPPQRISKIGMLRWMESVEIGTEATRATIIEKLFERKYLVNTSRGVAVTDL
GLGIVETLEIFFPELVKVELTRHFEKLMNDIKKGVVKREQVITEARNTLDMLIKKFNEKK
ETVGQILSSRLGIYTPPNKCAICNREEFSNGLCTYHYKANEQINKVYEEWKEREGVSFKE
YLERIKKLKSTGKWVIEVIEHFYGGK
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaacatctacagcacgataggtcgcggcccgggatttaccagtatttgggatttg
aagggtaaagtacttgtaattgctgagaaacccaaggctgcgaggaaaatagctgaagcg
ttgagccagagatattttgtgaggaatattaacgatgtaacatattttgaaatacgggat
ggtccccgccaaataattgttgcaagctcggtagggcacttgtatgggttgacaactcag
gaggagggctaccctgtttacacctatcaatgggttccactatacgtggttgagaagaaa
aaggcacactcgtacaattatctagaagccttaaggaaactgtgtactacgagcaactat
ttcgtaaacgcgtgcgattacgatattgagggtagcgtaatagggtacttgataattaaa
ttcaatggagaccctggaagggcttacagggcaaagttctcgagcctaaccctatcggag
ttgcgggaagcgttcaggagactaacccagctcgattacgaaatgatcgaagcagggctc
tgcaggcatgaattagattggttatggggtataaacgtaagcagggctataatgagaact
gtggaaagcttttcaaagaagaaaatcattctgagtgctgggagagttcaaacccctact
ctaaaatatgtatccgatattgagaaggaacgaaacctgttcatccctatcccagtctac
agtgtagttccaaccattgttaaagatggcgtgaaaataacattggaactaatcaacagc
ccgatcaggacgaagaaagacgcgtacgctctcgccgagaggattaggagagagggcttc
ttgacggtggaatcttatgtagaacatactacttcagtagccccgccccctccattcaac
cttggcgatctccaggaagaggctgcgaggatctacgggtatagtccatctaaaacccag
tcaattgccgagcaactctacctcgacgctctcataagctatccaagaacgaacagtcaa
aaactgccgagcgggcttgatttcaagagcctattgaccaagatctctcagatttcaaac
tatagtgctcttgtctcggatcttttgaaagagactaagggttatttgaaacctgtcgaa
ggcgataaggaagatccggcgcacccagcaatatatccaacaggggttagacccgttaag
ctaagtagcgagcaatgggctgtttacgatttaatagttagaaggtttctagccgctttc
gcgggtaacgcaataatttaccgctcaacagcaaaattcgctctcccaggtgagaatatc
gtctttcaagcaacagggcagggcattgaagatttaggctggtacaaatactacccattc
cacaagccaagtgttaaagtattgccgaggtttaggaatggggagagggttgaggttgtc
gaggttagcgttaaaacagcttatactaggccgccgcagaggatcagtaagattggaatg
ttgagatggatggaaagcgttgaaataggaacagaagctacaagggcaacgattatagag
aagctttttgagagaaaatacttggttaacacttcaagaggtgttgcagtcacagaccta
gggttagggattgttgaaacacttgaaatattcttccccgagctggttaaagttgagtta
accaggcattttgaaaaattaatgaacgatattaagaaaggagttgtgaagagagagcaa
gtaataactgaggccagaaacaccctggacatgttgatcaaaaaattcaatgagaagaag
gaaacagtgggacaaatactttcttcgagactcgggatatatacaccgccaaataaatgc
gcgatctgcaatagagaggagttttccaacggtctttgcacctatcactacaaggctaac
gaacagattaataaggtgtacgaggagtggaaggaaagagaaggcgtctcgtttaaagaa
tacctggagagaattaagaaactcaagtctacgggtaagtgggtcatagaagttatcgag
cacttttacggtggaaaataa
DBGET
integrated database retrieval system
