Thermosphaera aggregans: Tagg_0797
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Entry
Tagg_0797 CDS
T01237
Name
(GenBank) protein of unknown function UPF0027
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
tag
Thermosphaera aggregans
Brite
KEGG Orthology (KO) [BR:
tag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tag03016
]
Tagg_0797
Enzymes [BR:
tag01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Tagg_0797
Transfer RNA biogenesis [BR:
tag03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Tagg_0797
Prokaryotic type
tRNA splicing ligases
Tagg_0797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
RecX_HTH2
Motif
Other DBs
NCBI-ProteinID:
ADG91070
UniProt:
D5U1S0
LinkDB
All DBs
Position
complement(758982..760430)
Genome browser
AA seq
482 aa
AA seq
DB search
MVHVRVEKKGDYEWVIPRGAKPCMLTNAVVFADEYLIGKMQEDLTLEQAANVACLPGIRL
ESYVMPDGHQGYGFPIGGVAGFDVEEGVISPGGVGYDINCGVRVLRTDMDEEDVRPRLKE
LVEALFRNVPSGVGSTGHLRLSFSDLEEVLNHGVKWAVEHGFGWERDMEHIEEKGSMKDA
DASKVSRVAKQRGHEQLGTLGAGNHFLEIQVVDEIYDPEAAKVLGITRVGQVTLMIHTGS
RGLGHQVASDYLVTMERAMRKYGIQVPDRELAAVPFNSPEGQDYFKAMAAAANFAWTNRQ
IITHWVRESFKQVFKKPPEDLGLEIIYDVAHNIAKKEEHVVNGEKYRVVVHRKGATRAFP
PGHPDIPGDYRSIGQPVLIPGSMGTASYILVGTVNGARTWYSAPHGAGRWLSRGEAIRSY
SPERITEELARKGVVLKAATKRVISEEAPGAYKDVDKVVLTAHKVGIAKMVVRMRPIGVV
KG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgttagagtagagaagaaaggagactatgaatgggttatccctagaggagcc
aagccgtgcatgctcaccaacgcagtcgtcttcgccgacgagtatttgatcggtaagatg
caggaggatttaaccctggagcaggccgcgaacgtggcctgcctccccgggataaggctg
gaatcatacgtaatgcccgacggccaccagggctacggcttcccaataggaggggtcgcg
ggcttcgacgtggaggagggcgtgataagcccgggaggagtaggctacgacataaactgc
ggggtcagggtgctgaggacggatatggacgaggaggacgtcaggcccaggctgaaagag
cttgtggaagcattgttcaggaacgtccccagcggcgtggggtcaacgggtcatttaagg
ctgagcttcagcgacctggaagaggtcttaaaccacggggttaaatgggccgtggagcac
ggcttcgggtgggagagagacatggagcacatcgaggagaaggggagcatgaaagacgct
gacgcgagcaaggtcagcagggttgcgaagcagaggggtcacgagcaacttggaacactg
ggggccggaaaccacttcctggagatccaagtggtcgacgagatatacgaccccgaggcg
gccaaagtcctcgggataacgcgagtaggccaggtaaccctcatgatccacacggggagc
agggggctggggcaccaggttgcgagcgactacctcgtcaccatggagagggctatgagg
aagtatgggatacaggtccccgacagggagctggcggcagtacccttcaactcgcccgag
gggcaggactacttcaaggccatggcggccgcggcgaacttcgcctggacgaacaggcag
ataataacccactgggtcagggagagctttaaacaggttttcaagaaacccccggaggat
cttgggcttgaaataatatacgacgtagcccacaacatcgctaagaaagaggagcacgtc
gtcaacggcgagaagtacagggtcgtagtccacaggaagggggccactagagccttcccg
cccgggcaccccgacataccgggagactacaggagcattgggcagccggtgctgataccg
gggagcatgggcacggcgagctacatactggttggaacagtgaacggtgcgaggacatgg
tacagcgccccgcacggagcgggcaggtggctgagcaggggggaggcgataaggtcttac
agccctgagaggataaccgaggagctcgcgagaaaaggggtcgtgttgaaggctgcgacg
aaaagagtcatcagcgaggaagcccctggagcgtacaaggacgtggacaaggtagtgctg
acagcgcacaaggtagggatcgccaagatggtcgtcaggatgcgcccgataggggttgtc
aaaggatag
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