Thermosphaera aggregans: Tagg_0938
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Entry
Tagg_0938 CDS
T01237
Name
(GenBank) LSU ribosomal protein L24A
KO
K15172
transcription elongation factor SPT5
Organism
tag
Thermosphaera aggregans
Brite
KEGG Orthology (KO) [BR:
tag00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Tagg_0938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tag03021
]
Tagg_0938
03019 Messenger RNA biogenesis [BR:
tag03019
]
Tagg_0938
Transcription machinery [BR:
tag03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Tagg_0938
RNA polymerase I system
Tagg_0938
Messenger RNA biogenesis [BR:
tag03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Tagg_0938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW4_SPT5
KOW2_Spt5
SH3_KIN17_C
KIF2A-like_1st
Motif
Other DBs
NCBI-ProteinID:
ADG91210
UniProt:
D5U260
LinkDB
All DBs
Position
881467..881955
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AA seq
162 aa
AA seq
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MSGAEEAAGVGRIFAVRTTMGRELDVALVIARRAEELIAKGEDPGISSIVIPPNVRGYVF
FEVEKLASLYRLASEVKYVKASRPVKVSPEELEKLIMPKPVVESISVGDVVEIIRGPFRG
MKAQVTGIDRNKNMLTVNILEAAFAIPISIPSDYVKQVKKGE
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
ttgagcggagctgaggaagcagcgggtgttggaagaatatttgcagtgaggacaaccatg
gggcgtgagctagacgtagcgctggttatcgcgagaagggctgaggagctcatagccaag
ggcgaggatccgggtatttcaagcattgttatacctccgaacgtgagaggctacgtgttc
ttcgaagtggaaaagctcgcatccctttacaggctcgcatcggaagtaaagtacgtcaag
gcttcaagacctgttaaagtgtcgcctgaggagttggagaagctgatcatgcctaagccc
gtggtagaatcaatatctgtaggcgatgttgtcgagatcattagggggccgttcagaggg
atgaaggcccaggttacgggcatagatagaaataaaaacatgcttacagtgaatatttta
gaagcggctttcgcgatcccaatatccataccgagtgattacgtgaagcaggttaagaag
ggtgagtag
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