KEGG   Thermosphaera aggregans: Tagg_0938
Entry
Tagg_0938         CDS       T01237                                 
Name
(GenBank) LSU ribosomal protein L24A
  KO
K15172  transcription elongation factor SPT5
Organism
tag  Thermosphaera aggregans
Brite
KEGG Orthology (KO) [BR:tag00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    Tagg_0938
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tag03021]
    Tagg_0938
   03019 Messenger RNA biogenesis [BR:tag03019]
    Tagg_0938
Transcription machinery [BR:tag03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     Tagg_0938
  RNA polymerase I system
     Tagg_0938
Messenger RNA biogenesis [BR:tag03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     Tagg_0938
SSDB
Motif
Pfam: Spt5-NGN KOW KOW4_SPT5 KOW2_Spt5 SH3_KIN17_C KIF2A-like_1st
Other DBs
NCBI-ProteinID: ADG91210
UniProt: D5U260
LinkDB
Position
881467..881955
AA seq 162 aa
MSGAEEAAGVGRIFAVRTTMGRELDVALVIARRAEELIAKGEDPGISSIVIPPNVRGYVF
FEVEKLASLYRLASEVKYVKASRPVKVSPEELEKLIMPKPVVESISVGDVVEIIRGPFRG
MKAQVTGIDRNKNMLTVNILEAAFAIPISIPSDYVKQVKKGE
NT seq 489 nt   +upstreamnt  +downstreamnt
ttgagcggagctgaggaagcagcgggtgttggaagaatatttgcagtgaggacaaccatg
gggcgtgagctagacgtagcgctggttatcgcgagaagggctgaggagctcatagccaag
ggcgaggatccgggtatttcaagcattgttatacctccgaacgtgagaggctacgtgttc
ttcgaagtggaaaagctcgcatccctttacaggctcgcatcggaagtaaagtacgtcaag
gcttcaagacctgttaaagtgtcgcctgaggagttggagaagctgatcatgcctaagccc
gtggtagaatcaatatctgtaggcgatgttgtcgagatcattagggggccgttcagaggg
atgaaggcccaggttacgggcatagatagaaataaaaacatgcttacagtgaatatttta
gaagcggctttcgcgatcccaatatccataccgagtgattacgtgaagcaggttaagaag
ggtgagtag

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