Thermosphaera aggregans: Tagg_0965
Help
Entry
Tagg_0965 CDS
T01237
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
tag
Thermosphaera aggregans
Brite
KEGG Orthology (KO) [BR:
tag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tag03016
]
Tagg_0965
Enzymes [BR:
tag01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Tagg_0965
Transfer RNA biogenesis [BR:
tag03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Tagg_0965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Snf7
TPR_HPS5_insect
Motif
Other DBs
NCBI-ProteinID:
ADG91235
UniProt:
D5U285
LinkDB
All DBs
Position
complement(908554..909837)
Genome browser
AA seq
427 aa
AA seq
DB search
MRVYVETYGCALNRSDEALMKHVLIERGHTIVDNPSNADVVIINTCTVRLDTEQHMLNRI
SSLRELTQARKGKLIVAGCLPAAQPYKVAKTAPEASLVSPQNSSRIYVAVESDGRVVMLD
GVRERDRIGLCFENKVAPIPIQEGCLSNCSFCITKHARRVLVSHTVEAIVKSVETAVRMG
AVEIQLTGMDLGTYGMELYGKRYLPELVRRVSTLPGEFRVRIGMINPEHLPPILDELLEA
VKSDRRIYRFLHIPLQSGSDKVLKAMNRKYTVDEYRGLIKEVKQKISDVSIATDIIVGHP
LEDEEDFEETLKIIRELEFERVHFAGYSVRPNTLSAGMPNIPTRIRKERMLRMLETVEEV
GFKVREKYIGLTLPVFITEYSNTWVGRLDNYIPVILMEGDSLKYGITVETVIEKATFYDL
RGRVRSS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagagtttacgtggaaacatacggttgtgccctcaacaggagcgatgaagccttaatg
aagcatgttttaattgaaagagggcatactattgttgacaacccctctaacgctgatgtg
gtaataattaatacttgcaccgttaggcttgacacggagcaacacatgttgaatagaata
agtagtcttagagagctgactcaagctaggaagggtaaacttatagtagcggggtgcctc
cccgctgcacaaccctacaaggtggctaaaactgctccagaggcaagcctggtctccccg
caaaactcgtccagaatctatgtagcagtagagtctgatggaagggtcgttatgctagac
ggggtcagggaaagggatcgaatagggctgtgcttcgagaataaggttgccccaatacct
attcaagaaggatgcttgagcaattgctccttctgcataaccaagcatgccaggagagta
ttggtcagccataccgtcgaggcgatcgtgaaatccgttgagactgctgtgagaatgggt
gctgttgagatacagttgacgggcatggatctcggcacctacgggatggagctgtacggt
aagcggtatcttccagaactcgtgagaagagtctcaacgttgccgggagagttcagggtg
agaataggaatgatcaacccggagcatttaccacccattctcgacgagttgctggaagca
gtaaaatccgaccgcaggatttacaggtttctacacattccgttgcagtctggaagcgat
aaggtgttaaaagctatgaacagaaagtatactgttgacgagtataggggtttaatcaaa
gaggtgaagcagaaaataagtgacgtgagtattgcaaccgatatcatcgtgggccacccc
ttagaggatgaggaggatttcgaagagactttgaaaataattagggagttagagttcgag
agagtacactttgcaggttacagtgtaagacccaacacgctttcggccggaatgccgaac
attccgacacgcattaggaaggagagaatgctcaggatgcttgaaaccgtggaggaagta
ggttttaaggttagggagaaatatattgggttaactcttccagtgtttatcacggaatac
tctaatacatgggttggcaggctcgataactacatccccgtaatcctgatggaaggagac
tcgctaaaatatggaataaccgttgaaacagtgattgaaaaagctacattctacgacctg
agaggcagagttcggagtagctag
DBGET
integrated database retrieval system
