Thermosphaera aggregans: Tagg_1107
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Entry
Tagg_1107 CDS
T01237
Name
(GenBank) peptide chain release factor subunit 1 (aeRF-1)
KO
K03265
peptide chain release factor subunit 1
Organism
tag
Thermosphaera aggregans
Pathway
tag03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tag00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Tagg_1107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tag03019
]
Tagg_1107
03012 Translation factors [BR:
tag03012
]
Tagg_1107
Messenger RNA biogenesis [BR:
tag03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Tagg_1107
Translation factors [BR:
tag03012
]
Eukaryotic type
Release factors
Tagg_1107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
acVLRF1
eRF1_1
baeRF_family10
Motif
Other DBs
NCBI-ProteinID:
ADG91376
UniProt:
D5U2M6
LinkDB
All DBs
Position
1020547..1021638
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AA seq
363 aa
AA seq
DB search
MRVDKQKLREIIRELKKWKAHATILLSLYVPPGRPVSDVLNMLRQELSITDNIKLKKTKS
AVQRALSMAIDRLSKVPKIPDKGLVLFAGENPDTGESIIVMLIPPEEVSVYYYRTDKYFH
TEFLEEMVSESNIIGLLLIERDAATIGMLKGNRLKIVEELEDYIPGKHEKGGQSQRRYDR
IIEQMVEEFYKRVGEHANRVFLPLYEQGRLKGILVGGPAYAKYDFLEKDYLDYRLKKIVL
PELIDVGYQGEAGLREMILKAGDLLKEQEFADLLKYIEEFKLHLAKDDGLAVYGEDEVRN
ALEMGMVAVLIISEEREDVEKWLELAKKGGAKALVLSSDVPESEWFNKTFNGLAGILRAR
IYS
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtagataaacagaagcttagggaaataattagggagcttaaaaaatggaaagcg
catgcaacaatcctgctcagcctgtatgtgcctcctgggagacccgttagcgatgtttta
aacatgctgaggcaggagctgtcgataaccgataacataaaattgaaaaaaaccaagtct
gctgtccaaagagctctttcaatggccattgacaggcttagcaaggtcccaaagatccct
gataaaggattagtactgtttgccggcgagaacccggatactggtgaatcaataatagtc
atgttgatacctccagaggaggtttcagtgtactactacagaactgataaatacttccac
acggagtttcttgaagaaatggtttcagaatccaacattattgggcttctcctaatagag
agggatgctgcgactattggaatgttaaagggaaataggttaaaaatcgtagaagagctt
gaagactatattcccggtaagcatgagaagggtggtcagagccagcggaggtatgatagg
attattgagcaaatggtagaagagttttacaagagagtgggagagcacgctaatagggtc
tttctgccactttacgaacagggtaggttgaagggcattctggttggtggtccggcctac
gctaagtacgacttcctggaaaaggattacctggattataggctgaagaagattgtgctt
ccagaattgatcgatgtgggatatcagggtgaggcagggcttagagagatgattttgaag
gctggcgaccttcttaaagagcaagagtttgccgatcttttaaaatatatcgaagagttt
aagctacaccttgcaaaggatgacgggcttgccgtgtatggtgaagacgaagttagaaat
gccctggaaatggggatggttgcagtattgattattagcgaggagcgagaagatgttgag
aagtggttggagcttgcgaagaaaggcggggctaaggcgctggttctaagtagtgatgtt
ccggaatcagagtggtttaataagactttcaacggtttggcagggattctgcgcgcaagg
atttacagttaa
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