Thermosphaera aggregans: Tagg_1291
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Entry
Tagg_1291 CDS
T01237
Name
(GenBank) Transcription factor TFIIE, alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
tag
Thermosphaera aggregans
Pathway
tag03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tag00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Tagg_1291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tag03021
]
Tagg_1291
Transcription machinery [BR:
tag03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
Tagg_1291
Prokaryotic type
Archaeal type
TFE
Tagg_1291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HypA
MerR-DNA-bind
Lar_restr_allev
DUF7129
IBR_1
POLR3C_WHD
Motif
Other DBs
NCBI-ProteinID:
ADG91554
UniProt:
D5U354
LinkDB
All DBs
Position
1204669..1205208
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AA seq
179 aa
AA seq
DB search
MVVTLPRKEDNALLRIAREIIGKTYGEIALQLFDYMLENNGYVAEETLTKDTGIKSNEGR
RVLQKMSEEAIIVPGKLKTEDSTLHIWVLNRVALKSFVLNRLKKAREKLEARLNYERDNI
IYECPVCGRRYSFEEAYLNDFKCVNEGADLLEANNDEVISLLESKIKELDEKIAELSEL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcacactgccgaggaaggaggataacgcgttattgaggattgccagggagatc
ataggtaaaacgtatggagagatagcattgcaattattcgactacatgctcgagaacaac
gggtatgtcgccgaggaaacccttaccaaagatacggggatcaagtctaatgaggggagg
agggtgcttcagaaaatgtctgaggaagcaataatagtgcctgggaagttgaaaacagag
gattcaaccctccacatatgggttttaaacagggttgcgttaaagagcttcgtgctcaac
aggttgaagaaggctagggagaagctggaggctaggctcaattatgaaagggataatata
atttatgagtgccctgtgtgcggtagaagatactctttcgaagaagcatacttgaacgat
ttcaaatgtgttaacgagggtgcagatctcctggaggcgaataatgatgaagtaatatcc
cttcttgagtcaaaaatcaaggagctggatgagaaaatagctgagttgagtgagctctaa
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